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ACD79_65

Alias: ACD79_45641.9998.19

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD79_65_1

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2..214
DNA (213bp) protein (71aa)
SirA family protein n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LYU3_ACIFD (db=UNIREF evalue=2.0e-15 bit_score=84.7 identity=47.06 coverage=94.3661971830986)
SirA family protein
UPF0033 (db=PatternScan db_id=PS01148 from=1 to=25 evalue=0.0 interpro_id=IPR001455 interpro_description=SirA-like GO=Molecular Function: protein binding (GO:0005515), Cellular Component: cytoplasm (GO:0005737), Biological Process: tRNA processing (GO:0008033), Molecular Function: sulfurtransferase activity (GO:0016783))
SirA (db=HMMPfam db_id=PF01206 from=1 to=65 evalue=3.2e-22 interpro_id=IPR001455 interpro_description=SirA-like GO=Molecular Function: protein binding (GO:0005515), Cellular Component: cytoplasm (GO:0005737), Biological Process: tRNA processing (GO:0008033), Molecular Function: sulfurtransferase activity (GO:0016783))
ACD79_65_2

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207..794
DNA (588bp) protein (196aa)
hypothetical protein
seg (db=Seg db_id=seg from=114 to=133)
transmembrane_regions (db=TMHMM db_id=tmhmm from=55 to=77)
coiled-coil (db=Coil db_id=coil from=15 to=36 evalue=NA)
ACD79_65_3

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1133..2302
DNA (1170bp) protein (390aa)
seg (db=Seg db_id=seg from=7 to=16)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
Uncharacterized protein {ECO:0000313|EMBL:EKD26737.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD79_65_4

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2319..2744
DNA (426bp) protein (142aa)
Pyridoxamine 5'-phosphate oxidase-related FMN-binding n=1 Tax=Geobacter sp. M18 RepID=C6MSI8_9DELT (db=UNIREF evalue=2.0e-43 bit_score=177.0 identity=57.86 coverage=97.887323943662)
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
FMN-binding split barrel (db=superfamily db_id=SSF50475 from=3 to=134 evalue=9.3e-20 interpro_id=IPR009002 interpro_description=FMN-binding split barrel, related)
Pyridox_oxidase (db=HMMPfam db_id=PF01243 from=3 to=84 evalue=3.4e-12 interpro_id=IPR011576 interpro_description=Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO=Molecular Function: FMN binding (GO:0010181))
ACD79_65_5

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comp(2769..3341)
DNA (573bp) protein (191aa)
thiF-1; thiamin biosynthesis thiocarboxylate synthase
Activating enzymes of the ubiquitin-like proteins (db=superfamily db_id=SSF69572 from=2 to=190 evalue=2.0e-57 interpro_id=IPR009036 interpro_description=Molybdenum cofactor biosynthesis, MoeB)
no description (db=Gene3D db_id=G3DSA:3.40.50.720 from=1 to=190 evalue=6.1e-52 interpro_id=IPR016040 interpro_description=NAD(P)-binding domain GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: binding (GO:0005488), Biological Process: metabolic process (GO:0008152))
UBIQUITIN-ACTIVATING ENZYME E1 (db=HMMPanther db_id=PTHR10953 from=1 to=190 evalue=8.9e-43)
ACD79_65_6

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comp(3565..4836)
DNA (1272bp) protein (424aa)
nucleotidyltransferase/DNA polymerase involved in DNA repair
nucleotidyltransferase/DNA polymerase involved in DNA repair
DNA-directed DNA polymerase n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWI6_HALOH (db=UNIREF evalue=8.0e-88 bit_score=327.0 identity=47.64 coverage=89.1509433962264)
coiled-coil (db=Coil db_id=coil from=291 to=312 evalue=NA)
ACD79_65_7

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comp(4886..5536)
DNA (651bp) protein (217aa)
bifunctional glycosyl transferase/methyltransferase
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=27 to=214 evalue=2.9e-18)
Methyltransf_11 (db=HMMPfam db_id=PF08241 from=47 to=130 evalue=3.3e-14 interpro_id=IPR013216 interpro_description=Methyltransferase type 11 GO=Biological Process: metabolic process (GO:0008152), Molecular Function: methyltransferase activity (GO:0008168))
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=44 to=215 evalue=9.8e-14)
ACD79_65_8

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comp(5543..6331)
DNA (789bp) protein (263aa)
type 11 methyltransferase
transmembrane_regions (db=TMHMM db_id=tmhmm from=227 to=249)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=9 to=241 evalue=2.6e-22)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=9 to=180 evalue=3.5e-19)
ACD79_65_9
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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comp(6730..7593)
DNA (864bp) protein (288aa)
radical SAM domain-containing protein
MOAA_NIFB_PQQE (db=PatternScan db_id=PS01305 from=58 to=69 evalue=0.0 interpro_id=IPR000385 interpro_description=MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: metal ion binding (GO:0046872), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539))
Radical SAM enzymes (db=superfamily db_id=SSF102114 from=51 to=228 evalue=3.2e-32)
Radical_SAM (db=HMMPfam db_id=PF04055 from=58 to=204 evalue=3.1e-19 interpro_id=IPR007197 interpro_description=Radical SAM GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: iron-sulfur cluster binding (GO:0051536))
ACD79_65_10

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comp(7597..9108)
DNA (1512bp) protein (504aa)
hypothetical protein
Fe-S oxidoreductase n=1 Tax=Magnetospirillum magneticum AMB-1 RepID=Q2WB55_MAGSA (db=UNIREF evalue=3.0e-72 bit_score=276.0 identity=56.36 coverage=46.4285714285714)
Radical SAM enzymes (db=superfamily db_id=SSF102114 from=165 to=370 evalue=6.7e-30)
no description (db=HMMSmart db_id=SM00729 from=191 to=417 evalue=2.9e-22 interpro_id=IPR006638 interpro_description=Elongator protein 3/MiaB/NifB)
ACD79_65_11

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comp(9116..10036)
DNA (921bp) protein (307aa)
asparagine synthase (EC:6.3.5.4)
Adenine nucleotide alpha hydrolases-like (db=superfamily db_id=SSF52402 from=1 to=296 evalue=2.2e-35)
no description (db=Gene3D db_id=G3DSA:3.40.50.620 from=1 to=267 evalue=6.2e-30 interpro_id=IPR014729 interpro_description=Rossmann-like alpha/beta/alpha sandwich fold)
Asn_synthase (db=HMMPfam db_id=PF00733 from=1 to=230 evalue=1.1e-29 interpro_id=IPR001962 interpro_description=Asparagine synthase GO=Molecular Function: asparagine synthase (glutamine-hydrolyzing) activity (GO:0004066), Biological Process: asparagine biosynthetic process (GO:0006529))
Displaying 11 items

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