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ACD79_80

Alias: ACD79_26554.14792.21

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD79_80_1

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1..192
DNA (192bp) protein (64aa)
Type II and III secretion system protein n=2 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6R7_9BACT (db=UNIREF evalue=4.0e-11 bit_score=70.5 identity=61.54 coverage=79.6875)
type II and III secretion system protein
Secretin (db=HMMPfam db_id=PF00263 from=1 to=47 evalue=5.4e-15 interpro_id=IPR004846 interpro_description=Type II/III secretion system GO=Biological Process: protein secretion (GO:0009306))
BCTERIALGSPD (db=FPrintScan db_id=PR00811 from=35 to=49 evalue=1.8e-09)
ACD79_80_2

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297..869
DNA (573bp) protein (191aa)
coaE; dephospho-CoA kinase
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=1 to=188 evalue=2.5e-34)
TIGR00152: dephospho-CoA kinase (db=HMMTigr db_id=TIGR00152 from=2 to=182 evalue=4.9e-27 interpro_id=IPR001977 interpro_description=Dephospho-CoA kinase GO=Molecular Function: dephospho-CoA kinase activity (GO:0004140), Molecular Function: ATP binding (GO:0005524), Biological Process: coenzyme A biosynthetic process (GO:0015937))
CoaE (db=HMMPfam db_id=PF01121 from=2 to=173 evalue=1.6e-26 interpro_id=IPR001977 interpro_description=Dephospho-CoA kinase GO=Molecular Function: dephospho-CoA kinase activity (GO:0004140), Molecular Function: ATP binding (GO:0005524), Biological Process: coenzyme A biosynthetic process (GO:0015937))
ACD79_80_3

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comp(2126..2392)
DNA (267bp) protein (89aa)
seg (db=Seg db_id=seg from=14 to=28)
Uncharacterized protein {ECO:0000313|EMBL:EKD27968.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD79_80_4

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2809..2994
DNA (186bp) protein (62aa)
Transcription termination factor Rho n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N6X9_9BACT (db=UNIREF evalue=4.0e-14 bit_score=80.5 identity=61.67 coverage=95.1612903225807)
transcription termination factor Rho
ATP SYNTHASE (db=HMMPanther db_id=PTHR15184 from=1 to=39 evalue=2.2e-09)
TRANSCRIPTION TERMINATION FACTOR RHO (db=HMMPanther db_id=PTHR15184:SF2 from=1 to=39 evalue=2.2e-09)
ACD79_80_5

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comp(3026..3871)
DNA (846bp) protein (282aa)
hypothetical protein
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=2 to=256 evalue=4.2e-43)
Methyltrans_SAM (db=HMMPfam db_id=PF10672 from=61 to=251 evalue=6.6e-17 interpro_id=IPR019614 interpro_description=S-adenosylmethionine-dependent methyltransferase)
hypothetical protein; K06969 putative SAM-dependent methyltransferase alias=ACD79_26554.14792.21_5,ACD79_26554.14792.21G0005,ACD79_C00082G00005 id=125600 tax=ACD79 species=Alkaliphilus oremlandii genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
ACD79_80_6

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4143..4469
DNA (327bp) protein (109aa)
PilZ (db=HMMPfam db_id=PF07238 from=5 to=107 evalue=1.2e-11 interpro_id=IPR009875 interpro_description=Type IV pilus assembly PilZ)
Uncharacterized protein {ECO:0000313|EMBL:EKD27962.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD79_80_7

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4495..5562
DNA (1068bp) protein (356aa)
seg (db=Seg db_id=seg from=60 to=72)
Uncharacterized protein {ECO:0000313|EMBL:EKD27963.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD79_80_8

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5658..6863
DNA (1206bp) protein (402aa)
Acetylornithine/succinyldiaminopimelate aminotransferase (EC:2.6.1.11)
Acetylornithine/succinyldiaminopimelate aminotransferase (EC:2.6.1.11)
Strongly similar to acetylornithine aminotransferase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PX83_9BACT (db=UNIREF evalue=1.0e-89 bit_score=333.0 identity=43.44 coverage=96.2686567164179)
AA_TRANSFER_CLASS_3 (db=PatternScan db_id=PS00600 from=222 to=259 evalue=0.0 interpro_id=IPR005814 interpro_description=Aminotransferase class-III GO=Molecular Function: transaminase activity (GO:0008483), Molecular Function: pyridoxal phosphate binding (GO:0030170))
ACD79_80_9

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6850..7779
DNA (930bp) protein (310aa)
Ornithine carbamoyltransferase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQQ8_9FIRM (db=UNIREF evalue=1.0e-93 bit_score=347.0 identity=55.78 coverage=95.8064516129032)
argF; ornithine carbamoyltransferase (EC:2.1.3.3)
argF; ornithine carbamoyltransferase (EC:2.1.3.3)
CARBAMOYLTRANSFERASE (db=PatternScan db_id=PS00097 from=47 to=54 evalue=0.0 interpro_id=IPR006130 interpro_description=Aspartate/ornithine carbamoyltransferase GO=Biological Process: cellular amino acid metabolic process (GO:0006520), Molecular Function: amino acid binding (GO:0016597), Molecular Function: carboxyl- or carbamoyltransferase activity (GO:0016743))
ACD79_80_10

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8237..9220
DNA (984bp) protein (328aa)
Argininosuccinate lyase n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AKK7_SEBTE (db=UNIREF evalue=6.0e-95 bit_score=350.0 identity=52.8 coverage=97.5609756097561)
argininosuccinate lyase
argininosuccinate lyase
FUMARATE_LYASES (db=PatternScan db_id=PS00163 from=141 to=150 evalue=0.0 interpro_id=IPR020557 interpro_description=Fumarate lyase, conserved site GO=Molecular Function: catalytic activity (GO:0003824))
ACD79_80_11

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9222..10649
DNA (1428bp) protein (476aa)
adenylosuccinate lyase
adenylosuccinate lyase
Adenylosuccinate lyase n=1 Tax=Coraliomargarita akajimensis DSM 45221 RepID=D5EMT8_CORAD (db=UNIREF evalue=4.0e-160 bit_score=568.0 identity=58.9 coverage=98.9495798319328)
seg (db=Seg db_id=seg from=169 to=179)
ACD79_80_12

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11005..11388
DNA (384bp) protein (128aa)
response regulator receiver:Metal-dependent phosphohydrolase, HD subdomain-containing protein
Histidine kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DCM4_9BACT (db=UNIREF evalue=1.0e-13 bit_score=78.6 identity=34.15 coverage=89.84375)
CheY-like (db=superfamily db_id=SSF52172 from=1 to=121 evalue=4.3e-25 interpro_id=IPR011006 interpro_description=CheY-like)
no description (db=HMMSmart db_id=SM00448 from=1 to=117 evalue=4.2e-21 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
ACD79_80_13

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comp(11428..11883)
DNA (456bp) protein (152aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
DUF192 (db=HMMPfam db_id=PF02643 from=38 to=140 evalue=1.5e-30 interpro_id=IPR003795 interpro_description=Protein of unknown function DUF192)
exported protein; K09005 hypothetical protein alias=ACD79_26554.14792.21G0013,ACD79_26554.14792.21_13,ACD79_C00082G00013 id=125598 tax=ACD79 species=Alteromonas macleodii genus=Alteromonas taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
ACD79_80_14

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comp(11890..13662)
DNA (1773bp) protein (591aa)
seg (db=Seg db_id=seg from=284 to=301)
seg (db=Seg db_id=seg from=355 to=367)
Uncharacterized protein {ECO:0000313|EMBL:EKD27956.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD79_80_15

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comp(13696..14832)
DNA (1137bp) protein (379aa)
Primosomal protein N' n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D7U4_9BACT (db=UNIREF evalue=1.0e-87 bit_score=326.0 identity=39.84 coverage=98.4168865435356)
primosomal protein N'
primosomal protein N'
priA: primosomal protein N' (db=HMMTigr db_id=TIGR00595 from=1 to=375 evalue=6.8e-71 interpro_id=IPR005259 interpro_description=Primosomal protein n GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA replication (GO:0006260))
Displaying 15 items

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