Alias: ACD79_36162.3014.16
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
ACD79_103_1
uncultured bacterium, Bacteria
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Not on your lists |
comp(3..113)
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transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
Uncharacterized protein {ECO:0000313|EMBL:EKD27411.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD79_103_2
uncultured bacterium, Bacteria
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Not on your lists |
257..412
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putative PP-loop superfamily ATPase
Adenine nucleotide alpha hydrolases-like (db=superfamily db_id=SSF52402 from=6 to=50 evalue=3.8e-14)
ExsB (db=HMMPfam db_id=PF06508 from=7 to=41 evalue=5.5e-13 interpro_id=IPR018317 interpro_description=Queuosine synthesis-like)
ARGININOSUCCINATE SYNTHASE (db=HMMPanther db_id=PTHR11587 from=4 to=40 evalue=4.3e-05 interpro_id=IPR001518 interpro_description=Argininosuccinate synthase GO=Molecular Function: argininosuccinate synthase activity (GO:0004055), Molecular Function: ATP binding (GO:0005524), Biological Process: arginine biosynthetic process (GO:0006526))
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ACD79_103_3
uncultured bacterium, Bacteria
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Not on your lists |
413..1120
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preQ(0) biosynthesis protein QueC
ExsB n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C4N4_9PLAN (db=UNIREF evalue=2.0e-72 bit_score=275.0 identity=61.97 coverage=98.3050847457627)
seg (db=Seg db_id=seg from=171 to=186)
Uncharacterised conserved protein, ExsB type (db=HMMPIR db_id=PIRSF006293 from=5 to=235 evalue=6.5e-108 interpro_id=IPR004479 interpro_description=Exoenzyme S synthesis protein B/queuosine synthesis GO=Biological Process: queuosine biosynthetic process (GO:0008616), Molecular Function: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds (GO:0016810))
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ACD79_103_4
uncultured bacterium, Bacteria
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Not on your lists |
1129..1896
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RNA methyltransferase
Predicted tRNA/rRNA methyltransferase, LasT type (db=HMMPIR db_id=PIRSF004808 from=7 to=245 evalue=9.0e-68 interpro_id=IPR004384 interpro_description=RNA methyltransferase TrmH, group 1 GO=Biological Process: RNA processing (GO:0006396), Molecular Function: RNA methyltransferase activity (GO:0008173))
rRNA_methyl_1: RNA methyltransferase, T (db=HMMTigr db_id=TIGR00050 from=7 to=241 evalue=7.8e-46 interpro_id=IPR004384 interpro_description=RNA methyltransferase TrmH, group 1 GO=Biological Process: RNA processing (GO:0006396), Molecular Function: RNA methyltransferase activity (GO:0008173))
alpha/beta knot (db=superfamily db_id=SSF75217 from=8 to=187 evalue=7.0e-30)
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ACD79_103_5
uncultured bacterium, Bacteria
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Not on your lists |
1893..2636
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RNA methyltransferase
RRNA METHYLASE (db=HMMPanther db_id=PTHR12029:SF7 from=51 to=246 evalue=6.4e-54)
RNA METHYLTRANSFERASE (db=HMMPanther db_id=PTHR12029 from=51 to=246 evalue=6.4e-54)
rRNA_methyl_3: RNA methyltransferase, T (db=HMMTigr db_id=TIGR00186 from=4 to=244 evalue=1.4e-47 interpro_id=IPR004441 interpro_description=RNA methyltransferase TrmH, group 3 GO=Biological Process: RNA processing (GO:0006396), Molecular Function: RNA methyltransferase activity (GO:0008173))
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ACD79_103_6
unknown
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Not on your lists |
2985..3050
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2985..3050 + (rbs_motif=AGGA rbs_spacer=5-10bp)
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