ggKbase home page

ACD79_108

Alias: ACD79_46199.8000.21

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD79_108_1

Not on your lists

comp(3..1085)
DNA (1083bp) protein (361aa)
seg (db=Seg db_id=seg from=238 to=271)
seg (db=Seg db_id=seg from=8 to=22)
transmembrane_regions (db=TMHMM db_id=tmhmm from=334 to=356)
transmembrane_regions (db=TMHMM db_id=tmhmm from=299 to=321)
ACD79_108_2

Not on your lists

comp(1243..3078)
DNA (1836bp) protein (612aa)
polysaccharide biosynthesis protein CapD
polysaccharide biosynthesis protein CapD
Polysaccharide biosynthesis protein CapD n=3 Tax=Clostridium thermocellum RepID=A3DIS0_CLOTH (db=UNIREF evalue=1.0e-144 bit_score=517.0 identity=45.12 coverage=96.4052287581699)
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=28)
ACD79_108_3

Not on your lists

comp(3786..4553)
DNA (768bp) protein (256aa)
Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PW89_9BACT (db=UNIREF evalue=2.0e-48 bit_score=196.0 identity=42.54 coverage=99.21875)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=31)
transmembrane_regions (db=TMHMM db_id=tmhmm from=38 to=57)
ACD79_108_4

Not on your lists

comp(4556..5434)
DNA (879bp) protein (293aa)
methyltransferase FkbM
seg (db=Seg db_id=seg from=3 to=13)
NAD(P)-binding Rossmann-fold domains (db=superfamily db_id=SSF51735 from=1 to=284 evalue=8.4e-46)
no description (db=Gene3D db_id=G3DSA:3.40.50.720 from=3 to=222 evalue=7.2e-35 interpro_id=IPR016040 interpro_description=NAD(P)-binding domain GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: binding (GO:0005488), Biological Process: metabolic process (GO:0008152))
ACD79_108_5

Not on your lists

comp(5461..6687)
DNA (1227bp) protein (409aa)
group 1 glycosyl transferase
group 1 glycosyl transferase
Glycosyl transferase, group 1 n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TJS0_ALKMQ (db=UNIREF evalue=4.0e-93 bit_score=345.0 identity=48.28 coverage=98.2885085574572)
seg (db=Seg db_id=seg from=264 to=279)
ACD79_108_6

Not on your lists

comp(6709..7683)
DNA (975bp) protein (325aa)
hypothetical protein
D-glucuronyl C5-epimerase n=1 Tax=Vibrio cholerae RepID=D6NM17_VIBCH (db=UNIREF evalue=9.0e-36 bit_score=154.0 identity=34.34 coverage=78.1538461538461)
seg (db=Seg db_id=seg from=31 to=43)
C5-epim_C (db=HMMPfam db_id=PF06662 from=122 to=300 evalue=7.5e-52 interpro_id=IPR010598 interpro_description=D-glucuronyl C5-epimerase GO=Biological Process: glycosaminoglycan biosynthetic process (GO:0006024), Cellular Component: integral to membrane (GO:0016021), Molecular Function: racemase and epimerase activity, acting on carbohydrates and derivatives (GO:0016857))
ACD79_108_7

Not on your lists

comp(7818..8039)
DNA (222bp) protein (74aa)
7818..8039 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD26622.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 7 items

View Taxonomy