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ACD79_155

Alias: ACD79_45555.6519.18

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD79_155_1

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100..309
DNA (210bp) protein (70aa)
100..309 + (rbs_motif=AGGA/GGAG/GAGG rbs_spacer=11-12bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD26766.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD79_155_2

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comp(594..2039)
DNA (1446bp) protein (482aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
seg (db=Seg db_id=seg from=4 to=12)
seg (db=Seg db_id=seg from=258 to=272)
seg (db=Seg db_id=seg from=337 to=346)
ACD79_155_3

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comp(2055..2711)
DNA (657bp) protein (219aa)
hydrogenase nickel incorporation protein HypB
hypB: hydrogenase accessory protein HypB (db=HMMTigr db_id=TIGR00073 from=1 to=216 evalue=4.9e-83 interpro_id=IPR004392 interpro_description=Hydrogenase accessory protein HypB GO=Biological Process: protein complex assembly (GO:0006461), Molecular Function: nickel ion binding (GO:0016151))
Ni(2+)-binding GTPase, [NiFe]-hydrogenase/urease maturation factor (db=HMMPIR db_id=PIRSF005624 from=1 to=217 evalue=3.9e-68 interpro_id=IPR012202 interpro_description=[NiFe]-hydrogenase/urease maturation factor, Ni(2+)-binding GTPase GO=Molecular Function: nickel ion binding (GO:0016151))
cobW (db=HMMPfam db_id=PF02492 from=33 to=192 evalue=2.2e-36 interpro_id=IPR003495 interpro_description=Cobalamin (vitamin B12) biosynthesis CobW-like)
ACD79_155_4

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comp(2708..3040)
DNA (333bp) protein (111aa)
hydrogenase nickel incorporation protein HypA
seg (db=Seg db_id=seg from=9 to=21)
HypA (db=HMMPfam db_id=PF01155 from=1 to=104 evalue=2.1e-19 interpro_id=IPR000688 interpro_description=Hydrogenase nickel incorporation protein HypA/HybF GO=Biological Process: protein modification process (GO:0006464), Molecular Function: nickel ion binding (GO:0016151))
hydrogenase nickel insertion protein HypA; K04651 hydrogenase nickel incorporation protein HypA alias=ACD79_45555.6519.18G0004,ACD79_45555.6519.18_4,ACD79_C00158G00004 id=126192 tax=ACD79 species=Francisella philomiragia genus=Francisella taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
ACD79_155_5

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comp(3081..3440)
DNA (360bp) protein (120aa)
bacterial peptide chain release factor 1 (bRF-1)
PEPTIDE CHAIN RELEASE FACTOR 1 (db=HMMPanther db_id=PTHR11075:SF9 from=2 to=119 evalue=5.8e-55)
PEPTIDE CHAIN RELEASE FACTOR (db=HMMPanther db_id=PTHR11075 from=2 to=119 evalue=5.8e-55)
Release factor (db=superfamily db_id=SSF75620 from=2 to=118 evalue=9.4e-27)
ACD79_155_6

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comp(4192..4395)
DNA (204bp) protein (68aa)
50S ribosomal protein L31
L31: ribosomal protein L31 (db=HMMTigr db_id=TIGR00105 from=1 to=66 evalue=4.0e-37 interpro_id=IPR002150 interpro_description=Ribosomal protein L31 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_L31 (db=HMMPfam db_id=PF01197 from=1 to=65 evalue=3.6e-31 interpro_id=IPR002150 interpro_description=Ribosomal protein L31 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
L28p-like (db=superfamily db_id=SSF143800 from=1 to=64 evalue=1.0e-23)
ACD79_155_7

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comp(4848..5042)
DNA (195bp) protein (65aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=26 to=48)
seg (db=Seg db_id=seg from=26 to=41)
Uncharacterized protein {ECO:0000313|EMBL:EKD26759.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD79_155_8

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comp(5029..5814)
DNA (786bp) protein (262aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
Uncharacterized protein {ECO:0000313|EMBL:EKD26760.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD79_155_9

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comp(5881..6558)
DNA (678bp) protein (226aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
seg (db=Seg db_id=seg from=12 to=25)
Uncharacterized protein {ECO:0000313|EMBL:EKD26761.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 9 items

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