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ACD79_165

Alias: ACD79_10950.6105.21

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD79_165_1

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comp(1..1122)
DNA (1122bp) protein (374aa)
seg (db=Seg db_id=seg from=56 to=69)
seg (db=Seg db_id=seg from=220 to=229)
Uncharacterized protein {ECO:0000313|EMBL:EKD29103.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD79_165_2

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1299..2279
DNA (981bp) protein (327aa)
two component, sigma54 specific, transcriptional regulator, Fis family
seg (db=Seg db_id=seg from=312 to=322)
SIGMA54_INTERACT_2 (db=PatternScan db_id=PS00676 from=90 to=105 evalue=0.0 interpro_id=IPR002078 interpro_description=RNA polymerase sigma factor 54, interaction GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: transcription factor binding (GO:0008134))
SIGMA54_INTERACT_1 (db=PatternScan db_id=PS00675 from=31 to=44 evalue=0.0 interpro_id=IPR002078 interpro_description=RNA polymerase sigma factor 54, interaction GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: transcription factor binding (GO:0008134))
ACD79_165_3

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2266..2649
DNA (384bp) protein (128aa)
response regulator receiver protein
CheY-like (db=superfamily db_id=SSF52172 from=3 to=122 evalue=4.6e-36 interpro_id=IPR011006 interpro_description=CheY-like)
no description (db=HMMSmart db_id=SM00448 from=6 to=117 evalue=1.8e-33 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
no description (db=Gene3D db_id=G3DSA:3.40.50.2300 from=3 to=121 evalue=8.4e-31)
ACD79_165_4

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2854..4011
DNA (1158bp) protein (386aa)
histidine kinase
Sensor protein n=1 Tax=Geobacter sp. M18 RepID=C6MLA6_9DELT (db=UNIREF evalue=4.0e-41 bit_score=172.0 identity=43.03 coverage=61.6580310880829)
seg (db=Seg db_id=seg from=17 to=32)
seg (db=Seg db_id=seg from=152 to=165)
ACD79_165_5

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4013..4780
DNA (768bp) protein (256aa)
ABC transporter
seg (db=Seg db_id=seg from=42 to=57)
transmembrane_regions (db=TMHMM db_id=tmhmm from=221 to=243)
transmembrane_regions (db=TMHMM db_id=tmhmm from=168 to=190)
ACD79_165_6

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4802..6037
DNA (1236bp) protein (412aa)
argininosuccinate synthase n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C475C (db=UNIREF evalue=6.0e-146 bit_score=520.0 identity=59.8 coverage=98.7864077669903)
argininosuccinate synthase (EC:6.3.4.5)
argininosuccinate synthase (EC:6.3.4.5)
ARGININOSUCCIN_SYN_2 (db=PatternScan db_id=PS00565 from=122 to=133 evalue=0.0 interpro_id=IPR018223 interpro_description=Argininosuccinate synthase, conserved site GO=Molecular Function: argininosuccinate synthase activity (GO:0004055), Molecular Function: ATP binding (GO:0005524), Biological Process: arginine biosynthetic process (GO:0006526))
Displaying 6 items

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