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ACD79_325

Alias: ACD79_22053.19332.21

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD79_325_1

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comp(3..215)
DNA (213bp) protein (71aa)
Glycine dehydrogenase (Decarboxylating) n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U6C0_9DELT (db=UNIREF evalue=1.0e-08 bit_score=62.4 identity=47.06 coverage=87.3239436619718)
Glycine dehydrogenase (Decarboxylating) {ECO:0000313|EMBL:EKD28188.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
gcvPB; putative glycine dehydrogenase [decarboxylating] subunit 2 (EC:1.4.4.2)
ACD79_325_2

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comp(212..1546)
DNA (1335bp) protein (445aa)
Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q2K6_9BACT (db=UNIREF evalue=5.0e-119 bit_score=431.0 identity=49.43 coverage=97.5280898876404)
glycine cleavage system protein P (EC:1.4.4.2)
glycine cleavage system protein P (EC:1.4.4.2)
GLYCINE DEHYDROGENASE (db=HMMPanther db_id=PTHR11773 from=1 to=438 evalue=4.9e-159 interpro_id=IPR020581 interpro_description=Glycine cleavage system P-protein-like)
ACD79_325_3

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comp(1548..1922)
DNA (375bp) protein (125aa)
glycine cleavage system H protein
LIPOYL (db=PatternScan db_id=PS00189 from=48 to=77 evalue=0.0 interpro_id=IPR003016 interpro_description=2-oxo acid dehydrogenase, lipoyl-binding site)
gcvH: glycine cleavage system H protein (db=HMMTigr db_id=TIGR00527 from=3 to=124 evalue=1.8e-44 interpro_id=IPR017453 interpro_description=Glycine cleavage H-protein, subgroup)
GLYCINE CLEAVAGE SYSTEM H PROTEIN (db=HMMPanther db_id=PTHR11715 from=1 to=124 evalue=4.2e-43 interpro_id=IPR002930 interpro_description=Glycine cleavage H-protein GO=Cellular Component: mitochondrion (GO:0005739), Cellular Component: glycine cleavage complex (GO:0005960), Biological Process: glycine catabolic process (GO:0006546))
ACD79_325_4

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comp(1915..3015)
DNA (1101bp) protein (367aa)
gcvT; glycine cleavage system aminomethyltransferase T
gcvT; glycine cleavage system aminomethyltransferase T
Aminomethyltransferase n=2 Tax=Thermoanaerobacteraceae RepID=GCST_THETN (db=UNIREF evalue=6.0e-100 bit_score=367.0 identity=51.82 coverage=95.6403269754768)
Predicted aminomethyltransferase (db=HMMPIR db_id=PIRSF006487 from=1 to=364 evalue=7.2e-137 interpro_id=IPR006223 interpro_description=Glycine cleavage system T protein GO=Molecular Function: aminomethyltransferase activity (GO:0004047), Biological Process: glycine catabolic process (GO:0006546))
ACD79_325_5

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comp(3265..5277)
DNA (2013bp) protein (671aa)
methyl-accepting chemotaxis protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=29)
transmembrane_regions (db=TMHMM db_id=tmhmm from=316 to=338)
seg (db=Seg db_id=seg from=609 to=622)
ACD79_325_6

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comp(5343..6446)
DNA (1104bp) protein (368aa)
Response regulator receiver sensor signal transduction histidine kinase
CheY-like (db=superfamily db_id=SSF52172 from=1 to=162 evalue=1.3e-33 interpro_id=IPR011006 interpro_description=CheY-like)
no description (db=HMMSmart db_id=SM00448 from=4 to=120 evalue=6.3e-33 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
SENSOR HISTIDINE KINASE-RELATED (db=HMMPanther db_id=PTHR23283 from=10 to=364 evalue=1.2e-30)
ACD79_325_7

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comp(6732..9389)
DNA (2658bp) protein (886aa)
PAS/PAC sensor signal transduction histidine kinase
coiled-coil (db=Coil db_id=coil from=226 to=247 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=165 to=187)
coiled-coil (db=Coil db_id=coil from=489 to=510 evalue=NA)
ACD79_325_8

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comp(9491..10924)
DNA (1434bp) protein (478aa)
two component, sigma54 specific, transcriptional regulator, Fis family
coiled-coil (db=Coil db_id=coil from=132 to=153 evalue=NA)
SIGMA54_INTERACT_3 (db=PatternScan db_id=PS00688 from=372 to=381 evalue=0.0 interpro_id=IPR002078 interpro_description=RNA polymerase sigma factor 54, interaction GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: transcription factor binding (GO:0008134))
SIGMA54_INTERACT_2 (db=PatternScan db_id=PS00676 from=245 to=260 evalue=0.0 interpro_id=IPR002078 interpro_description=RNA polymerase sigma factor 54, interaction GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: transcription factor binding (GO:0008134))
ACD79_325_9

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comp(11038..11949)
DNA (912bp) protein (304aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Raphidiopsis brookii D9 RepID=D4TP10_9NOST (db=UNIREF evalue=9.0e-24 bit_score=114.0 identity=30.15 coverage=83.2236842105263)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=4 to=18)
ACD79_325_10

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14523..18983
DNA (4461bp) protein (1487aa)
seg (db=Seg db_id=seg from=316 to=333)
seg (db=Seg db_id=seg from=477 to=488)
seg (db=Seg db_id=seg from=499 to=510)
seg (db=Seg db_id=seg from=725 to=738)
ACD79_325_11

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comp(18999..19250)
DNA (252bp) protein (84aa)
seg (db=Seg db_id=seg from=69 to=81)
Uncharacterized protein {ECO:0000313|EMBL:EKD28187.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 11 items

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