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ACD79_372

Alias: ACD79_23841.23481.20

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD79_372_1

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3..3185
DNA (3183bp) protein (1061aa)
nolG; nodulation protein NolG
coiled-coil (db=Coil db_id=coil from=309 to=330 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=1017 to=1039)
transmembrane_regions (db=TMHMM db_id=tmhmm from=453 to=475)
ACD79_372_2

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comp(3120..3737)
DNA (618bp) protein (206aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
transmembrane_regions (db=TMHMM db_id=tmhmm from=102 to=124)
transmembrane_regions (db=TMHMM db_id=tmhmm from=137 to=156)
transmembrane_regions (db=TMHMM db_id=tmhmm from=176 to=198)
ACD79_372_3

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4481..6511
DNA (2031bp) protein (677aa)
Acriflavin resistance protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
seg (db=Seg db_id=seg from=148 to=162)
seg (db=Seg db_id=seg from=63 to=83)
ACD79_372_4

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6519..7607
DNA (1089bp) protein (363aa)
group 1 glycosyl transferase
Second mannosyl transferase n=2 Tax=Bacillus cereus RepID=C2ZHX3_BACCE (db=UNIREF evalue=2.0e-26 bit_score=123.0 identity=29.28 coverage=86.5013774104683)
seg (db=Seg db_id=seg from=183 to=196)
seg (db=Seg db_id=seg from=131 to=142)
ACD79_372_5

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7829..10348
DNA (2520bp) protein (840aa)
DNA topoisomerase 1 n=111 Tax=Enterobacteriaceae RepID=TOP1_ECOLI (db=UNIREF evalue=0.0 bit_score=877.0 identity=52.26 coverage=99.1666666666667)
DNA topoisomerase I subunit omega (EC:5.99.1.2)
DNA topoisomerase I subunit omega (EC:5.99.1.2)
topA_bact: DNA topoisomerase I (db=HMMTigr db_id=TIGR01051 from=3 to=613 evalue=0.0 interpro_id=IPR005733 interpro_description=DNA topoisomerase I, bacterial-type GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA topoisomerase type I activity (GO:0003917), Cellular Component: chromosome (GO:0005694), Biological Process: DNA topological change (GO:0006265))
ACD79_372_6

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10458..10766
DNA (309bp) protein (103aa)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=16 evalue=6.0)
Uncharacterized protein {ECO:0000313|EMBL:EKD28119.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD79_372_7

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10896..11798
DNA (903bp) protein (301aa)
aldose 1-epimerase
Galactose mutarotase-like (db=superfamily db_id=SSF74650 from=1 to=300 evalue=7.5e-38 interpro_id=IPR011013 interpro_description=Glycoside hydrolase-type carbohydrate-binding GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: carbohydrate metabolic process (GO:0005975), Molecular Function: carbohydrate binding (GO:0030246))
Aldose_epim (db=HMMPfam db_id=PF01263 from=18 to=270 evalue=2.5e-30 interpro_id=IPR008183 interpro_description=Aldose 1-epimerase GO=Biological Process: carbohydrate metabolic process (GO:0005975), Molecular Function: isomerase activity (GO:0016853))
no description (db=Gene3D db_id=G3DSA:2.70.98.10 from=6 to=290 evalue=4.2e-16 interpro_id=IPR014718 interpro_description=Glycoside hydrolase-type carbohydrate-binding, subgroup GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: carbohydrate metabolic process (GO:0005975), Molecular Function: carbohydrate binding (GO:0030246))
ACD79_372_8

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comp(11795..12442)
DNA (648bp) protein (216aa)
metal dependent phophohydrolase
HDIG domain protein n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LEZ3_9BACT (db=UNIREF evalue=1.0e-32 bit_score=143.0 identity=39.33 coverage=80.5555555555556)
HD (db=HMMPfam db_id=PF01966 from=56 to=174 evalue=4.2e-07 interpro_id=IPR006674 interpro_description=Metal-dependent phosphohydrolase, HD subdomain)
HDIG: uncharacterized domain HDIG (db=HMMTigr db_id=TIGR00277 from=51 to=139 evalue=2.1e-05 interpro_id=IPR006675 interpro_description=Uncharacterised protein family HDIG)
ACD79_372_9

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comp(12466..13152)
DNA (687bp) protein (229aa)
TPR domain protein n=1 Tax=Arthrospira platensis NIES-39 RepID=D4ZUU0_SPIPL (db=UNIREF evalue=3.0e-21 bit_score=105.0 identity=31.75 coverage=90.8296943231441)
TPR domain-containing protein
no description (db=Gene3D db_id=G3DSA:1.25.40.10 from=51 to=223 evalue=4.3e-34 interpro_id=IPR011990 interpro_description=Tetratricopeptide-like helical GO=Molecular Function: binding (GO:0005488))
TPR-like (db=superfamily db_id=SSF48452 from=75 to=227 evalue=5.5e-33)
ACD79_372_10

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comp(13142..14401)
DNA (1260bp) protein (420aa)
Diaminopimelate decarboxylase n=1 Tax=Coraliomargarita akajimensis DSM 45221 RepID=D5EK78_CORAD (db=UNIREF evalue=7.0e-128 bit_score=461.0 identity=53.72 coverage=98.0952380952381)
diaminopimelate decarboxylase
diaminopimelate decarboxylase
seg (db=Seg db_id=seg from=173 to=186)
ACD79_372_11

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comp(14458..14859)
DNA (402bp) protein (134aa)
two-component sensor histidine kinase / response regulator
CheY-like (db=superfamily db_id=SSF52172 from=8 to=131 evalue=3.4e-32 interpro_id=IPR011006 interpro_description=CheY-like)
no description (db=HMMSmart db_id=SM00448 from=11 to=126 evalue=1.5e-31 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
no description (db=Gene3D db_id=G3DSA:3.40.50.2300 from=8 to=131 evalue=1.4e-26)
ACD79_372_12

Not on your lists

comp(14980..15660)
DNA (681bp) protein (227aa)
leucyl/phenylalanyl-tRNA--protein transferase (EC:2.3.2.6)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=5 to=225 evalue=1.4e-59 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
Leu_Phe_trans (db=HMMPfam db_id=PF03588 from=39 to=206 evalue=9.2e-54 interpro_id=IPR004616 interpro_description=Leucyl/phenylalanyl-tRNA-protein transferase GO=Molecular Function: leucyltransferase activity (GO:0008914), Biological Process: protein catabolic process (GO:0030163))
aat: leucyl/phenylalanyl-tRNA--protein trans (db=HMMTigr db_id=TIGR00667 from=36 to=225 evalue=1.6e-48 interpro_id=IPR004616 interpro_description=Leucyl/phenylalanyl-tRNA-protein transferase GO=Molecular Function: leucyltransferase activity (GO:0008914), Biological Process: protein catabolic process (GO:0030163))
ACD79_372_13

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comp(15811..16125)
DNA (315bp) protein (105aa)
15811..16125 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD28126.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD79_372_14

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comp(16205..17026)
DNA (822bp) protein (274aa)
16205..17026 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD28127.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD79_372_15

Not on your lists

comp(17167..18330)
DNA (1164bp) protein (388aa)
seg (db=Seg db_id=seg from=41 to=52)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
Uncharacterized protein {ECO:0000313|EMBL:EKD28128.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD79_372_16

Not on your lists

18522..19514
DNA (993bp) protein (331aa)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
Nucleoside-diphosphate-sugar epimerase (UDP-glucose 4-epimerase) n=1 Tax=Neptuniibacter caesariensis RepID=Q2BJE0_9GAMM (db=UNIREF evalue=5.0e-58 bit_score=228.0 identity=41.59 coverage=91.8429003021148)
seg (db=Seg db_id=seg from=16 to=27)
NAD DEPENDENT EPIMERASE/DEHYDRATASE (db=HMMPanther db_id=PTHR10366 from=5 to=320 evalue=1.1e-65)
ACD79_372_17

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19514..20257
DNA (744bp) protein (248aa)
family 2 glycosyl transferase
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=1 to=246 evalue=4.5e-21)
GLYCOSYLTRANSFERASE RELATED (db=HMMPanther db_id=PTHR10859 from=8 to=242 evalue=1.4e-19)
no description (db=Gene3D db_id=G3DSA:3.90.550.10 from=1 to=233 evalue=1.4e-14)
ACD79_372_18

Not on your lists

comp(20280..20537)
DNA (258bp) protein (86aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=21)
transmembrane_regions (db=TMHMM db_id=tmhmm from=34 to=53)
transmembrane_regions (db=TMHMM db_id=tmhmm from=58 to=80)
ACD79_372_19

Not on your lists

22116..23003
DNA (888bp) protein (296aa)
Strongly similar to glutamate-ammonia ligase type III n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q0M6_9BACT (db=UNIREF evalue=9.0e-93 bit_score=343.0 identity=58.36 coverage=98.6486486486486)
glutamine synthetase (EC:6.3.1.2)
glutamine synthetase (EC:6.3.1.2)
seg (db=Seg db_id=seg from=241 to=252)
ACD79_372_20

Not on your lists

23277..23519
DNA (243bp) protein (81aa)
Protein mraZ n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G7X8_9FIRM (db=UNIREF evalue=3.0e-15 bit_score=84.0 identity=46.91 coverage=92.5925925925926)
mraZ protein
MraZ (db=HMMPfam db_id=PF02381 from=1 to=73 evalue=2.3e-16 interpro_id=IPR020603 interpro_description=MraZ domain)
MRAZ_BACSU_P55343; (db=BlastProDom db_id=PD006745 from=1 to=81 evalue=6.0e-16 interpro_id=IPR003444 interpro_description=MraZ)
Displaying 20 items

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