ggKbase home page

ACD79_537

Alias: ACD79_17686.3149.21

Search features with annotation key words

Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD79_537_1

Not on your lists

1..705
DNA (705bp) protein (235aa)
translation initiation factor IF-2
seg (db=Seg db_id=seg from=80 to=95)
IF2 (db=PatternScan db_id=PS01176 from=185 to=207 evalue=0.0 interpro_id=IPR000178 interpro_description=Initiation factor 2 GO=Molecular Function: translation initiation factor activity (GO:0003743), Molecular Function: GTP binding (GO:0005525), Cellular Component: intracellular (GO:0005622), Biological Process: translational initiation (GO:0006413))
Initiation factor IF2/eIF5b, domain 3 (db=superfamily db_id=SSF52156 from=9 to=140 evalue=1.5e-29)
ACD79_537_2

Not on your lists

751..1101
DNA (351bp) protein (117aa)
Ribosome-binding factor A
Ribosome-binding factor A n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYQ3_9BACT (db=UNIREF evalue=3.0e-12 bit_score=74.3 identity=39.76 coverage=70.0854700854701)
seg (db=Seg db_id=seg from=5 to=22)
RBFA (db=PatternScan db_id=PS01319 from=75 to=96 evalue=0.0 interpro_id=IPR020053 interpro_description=Ribosome-binding factor A, conserved site GO=Biological Process: rRNA processing (GO:0006364))
ACD79_537_3

Not on your lists

1094..1828
DNA (735bp) protein (245aa)
tRNA pseudouridine synthase B n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HSS9_9FIRM (db=UNIREF evalue=2.0e-41 bit_score=172.0 identity=41.53 coverage=89.3877551020408)
truB; tRNA pseudouridine synthase B (EC:4.2.1.70)
seg (db=Seg db_id=seg from=91 to=102)
TruB: tRNA pseudouridine synthase B (db=HMMTigr db_id=TIGR00431 from=7 to=230 evalue=1.3e-61 interpro_id=IPR014780 interpro_description=Pseudouridine synthase II, TruB, N-terminal, bacterial-type GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982))
ACD79_537_4

Not on your lists

2828..3187
DNA (360bp) protein (120aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase
HOMO-OLIGOMERIC FLAVIN CONTAINING CYS DECARBOXYLASE FAMILY (db=HMMPanther db_id=PTHR14359 from=12 to=118 evalue=9.9e-30)
PANTOTHENATE METABOLISM FLAVOPROTEIN DFP (db=HMMPanther db_id=PTHR14359:SF6 from=12 to=118 evalue=9.9e-30)
no description (db=Gene3D db_id=G3DSA:3.40.50.1950 from=5 to=118 evalue=1.6e-27 interpro_id=IPR003382 interpro_description=Flavoprotein GO=Molecular Function: catalytic activity (GO:0003824))
Displaying 4 items

View Taxonomy