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ACD79_573

Alias: ACD79_43180.6511.19

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD79_573_1

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comp(3..176)
DNA (174bp) protein (58aa)
rnfE1; protein RnfE1
Rnf-Nqr (db=HMMPfam db_id=PF02508 from=9 to=58 evalue=7.0e-15 interpro_id=IPR003667 interpro_description=Electron transport complex, Rnf/Nqr GO=Cellular Component: membrane (GO:0016020))
rnfE1; RnfE1 alias=ACD79_43180.6511.19G0001,ACD79_43180.6511.19_1,ACD79_C00579G00001 id=128892 tax=ACD79 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
RnfE1 {ECO:0000313|EMBL:EKD26963.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD79_573_2

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comp(328..909)
DNA (582bp) protein (194aa)
FMN-binding domain-containing protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
FMN_bind (db=HMMPfam db_id=PF04205 from=91 to=177 evalue=1.0e-12 interpro_id=IPR007329 interpro_description=FMN-binding GO=Molecular Function: FMN binding (GO:0010181), Cellular Component: membrane (GO:0016020))
no description (db=HMMSmart db_id=SM00900 from=91 to=182 evalue=2.6e-11 interpro_id=IPR007329 interpro_description=FMN-binding GO=Molecular Function: FMN binding (GO:0010181), Cellular Component: membrane (GO:0016020))
ACD79_573_3

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comp(1024..2040)
DNA (1017bp) protein (339aa)
RnfABCDGE type electron transport complex subunit D
RnfABCDGE type electron transport complex subunit D
Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZSV3_DESOH (db=UNIREF evalue=2.0e-95 bit_score=352.0 identity=57.14 coverage=96.4601769911504)
transmembrane_regions (db=TMHMM db_id=tmhmm from=307 to=326)
ACD79_573_4

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comp(2047..3393)
DNA (1347bp) protein (449aa)
RnfABCDGE type electron transport complex subunit C
RnfABCDGE type electron transport complex subunit C
Electron transport complex, RnfABCDGE type, C subunit n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZSV2_DESOH (db=UNIREF evalue=4.0e-122 bit_score=442.0 identity=53.39 coverage=98.2182628062361)
seg (db=Seg db_id=seg from=418 to=428)
ACD79_573_5

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comp(3390..3689)
DNA (300bp) protein (100aa)
seg (db=Seg db_id=seg from=47 to=61)
seg (db=Seg db_id=seg from=8 to=20)
transmembrane_regions (db=TMHMM db_id=tmhmm from=68 to=90)
transmembrane_regions (db=TMHMM db_id=tmhmm from=36 to=58)
ACD79_573_6

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comp(3877..4353)
DNA (477bp) protein (159aa)
hypothetical protein
Ferritin-like (db=superfamily db_id=SSF47240 from=7 to=158 evalue=2.1e-09 interpro_id=IPR009078 interpro_description=Ferritin/ribonucleotide reductase-like GO=Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: transition metal ion binding (GO:0046914), Biological Process: oxidation reduction (GO:0055114))
Uncharacterized protein {ECO:0000313|EMBL:EKD26968.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein alias=ACD79_43180.6511.19G0006,ACD79_43180.6511.19_6,ACD79_C00579G00006 id=128893 tax=ACD79 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
ACD79_573_7

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4519..4752
DNA (234bp) protein (78aa)
hypC; putative hydrogenase expression/formation protein HypC
Hydrogenase assembly chaperone HypC/HupF n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LVG7_9FIRM (db=UNIREF evalue=4.0e-11 bit_score=70.5 identity=48.57 coverage=88.4615384615385)
HUPF_HYPC (db=PatternScan db_id=PS01097 from=1 to=9 evalue=0.0 interpro_id=IPR019812 interpro_description=Hydrogenase assembly chaperone, conserved site)
HupF_HypC (db=HMMPfam db_id=PF01455 from=1 to=65 evalue=2.3e-21 interpro_id=IPR001109 interpro_description=Hydrogenase expression/formation protein, HupF/HypC)
ACD79_573_8

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4736..5821
DNA (1086bp) protein (362aa)
hydrogenase expression/formation protein HypD
hydrogenase expression/formation protein HypD
Hydrogenase expression/formation protein HypD n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PBW8_CLOTS (db=UNIREF evalue=1.0e-95 bit_score=353.0 identity=54.22 coverage=90.6077348066298)
seg (db=Seg db_id=seg from=2 to=20)
ACD79_573_9

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5823..6551
DNA (729bp) protein (243aa)
hydrogenase
seg (db=Seg db_id=seg from=94 to=114)
seg (db=Seg db_id=seg from=18 to=29)
hypE: hydrogenase expression/formation prote (db=HMMTigr db_id=TIGR02124 from=5 to=243 evalue=1.1e-68 interpro_id=IPR011854 interpro_description=Hydrogenase expression/formation protein HypE)
Displaying 9 items

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