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ACD79_587

Alias: ACD79_4985.6803.9

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Displaying 3 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD79_587_1

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2..1720
DNA (1719bp) protein (573aa)
pectate lyase
EF_HAND_1 (db=PatternScan db_id=PS00018 from=521 to=533 evalue=0.0 interpro_id=IPR018247 interpro_description=EF-Hand 1, calcium-binding site)
EF_HAND_1 (db=PatternScan db_id=PS00018 from=550 to=562 evalue=0.0 interpro_id=IPR018247 interpro_description=EF-Hand 1, calcium-binding site)
Pectin lyase-like (db=superfamily db_id=SSF51126 from=46 to=429 evalue=4.1e-38 interpro_id=IPR011050 interpro_description=Pectin lyase fold/virulence factor)
be careful, pfam is for fibronectin domain, not catalytic kelly wrighton (5/23/13)
ACD79_587_2

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1809..4334
DNA (2526bp) protein (842aa)
hypothetical protein
Pectate lyase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6BYZ7_9PLAN (db=UNIREF evalue=1.0e-59 bit_score=235.0 identity=36.57 coverage=47.8622327790974)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=28)
seg (db=Seg db_id=seg from=387 to=404)
be careful, pfam is for fibronectin domain, not catalytic kelly wrighton (5/23/13)
ACD79_587_3

Not on your lists

4503..6839
DNA (2337bp) protein (779aa)
seg (db=Seg db_id=seg from=603 to=613)
seg (db=Seg db_id=seg from=552 to=568)
Pectin lyase-like (db=superfamily db_id=SSF51126 from=584 to=775 evalue=1.1e-22 interpro_id=IPR011050 interpro_description=Pectin lyase fold/virulence factor)
Pectin lyase-like (db=superfamily db_id=SSF51126 from=8 to=428 evalue=6.3e-20 interpro_id=IPR011050 interpro_description=Pectin lyase fold/virulence factor)
Displaying 3 items

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