ggKbase home page

ACD79_592

Alias: ACD79_7459.5927.21

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD79_592_1

Not on your lists

149..823
DNA (675bp) protein (225aa)
PhoU family transcriptional regulator
seg (db=Seg db_id=seg from=49 to=62)
phoU_full: phosphate transport system regul (db=HMMTigr db_id=TIGR02135 from=3 to=213 evalue=8.5e-61 interpro_id=IPR008170 interpro_description=PhoU)
PhoU-like (db=superfamily db_id=SSF109755 from=4 to=215 evalue=9.3e-56)
ACD79_592_2
delta proteobacterium NaphS2, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

842..1336
DNA (495bp) protein (165aa)
phoB; winged-helix phosphate transcriptional response regulator
seg (db=Seg db_id=seg from=48 to=63)
no description (db=HMMSmart db_id=SM00448 from=4 to=117 evalue=3.1e-43 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
CheY-like (db=superfamily db_id=SSF52172 from=1 to=129 evalue=1.6e-39 interpro_id=IPR011006 interpro_description=CheY-like)
ACD79_592_3

Not on your lists

1395..3053
DNA (1659bp) protein (553aa)
Type IV pilus assembly protein PilM n=1 Tax=bacterium Ellin514 RepID=B9XEZ8_9BACT (db=UNIREF evalue=4.0e-49 bit_score=199.0 identity=31.25 coverage=65.6419529837251)
cell division protein FtsA
transmembrane_regions (db=TMHMM db_id=tmhmm from=380 to=397)
seg (db=Seg db_id=seg from=429 to=443)
ACD79_592_4

Not on your lists

3031..3783
DNA (753bp) protein (251aa)
coiled-coil (db=Coil db_id=coil from=90 to=111 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
seg (db=Seg db_id=seg from=92 to=110)
Uncharacterized protein {ECO:0000313|EMBL:EKD26051.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD79_592_5

Not on your lists

3780..4805
DNA (1026bp) protein (342aa)
hypothetical protein
Predicted calcium-binding protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C3A4_9GAMM (db=UNIREF evalue=3.0e-08 bit_score=63.2 identity=37.0 coverage=27.7777777777778)
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=26)
seg (db=Seg db_id=seg from=267 to=279)
ACD79_592_6

Not on your lists

4880..5965
DNA (1086bp) protein (362aa)
seg (db=Seg db_id=seg from=169 to=180)
seg (db=Seg db_id=seg from=43 to=54)
TPR-like (db=superfamily db_id=SSF48452 from=53 to=180 evalue=6.0e-09)
no description (db=Gene3D db_id=G3DSA:1.25.40.10 from=53 to=180 evalue=1.0e-06 interpro_id=IPR011990 interpro_description=Tetratricopeptide-like helical GO=Molecular Function: binding (GO:0005488))
Displaying 6 items

View Taxonomy