ggKbase home page

ACD7_89

Alias: ACD7_44539.2112.5

Search features with annotation key words

Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD7_89_1

Not on your lists

comp(3..530)
DNA (528bp) protein (176aa)
integrase catalytic subunit
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=118 to=175 evalue=2.4e-14 interpro_id=IPR012337 interpro_description=Polynucleotidyl transferase, ribonuclease H fold GO=Molecular Function: nucleic acid binding (GO:0003676))
rve (db=HMMPfam db_id=PF00665 from=120 to=174 evalue=1.8e-08 interpro_id=IPR001584 interpro_description=Integrase, catalytic core GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA integration (GO:0015074))
INTEGRASE (db=ProfileScan db_id=PS50994 from=118 to=176 evalue=10.029 interpro_id=IPR001584 interpro_description=Integrase, catalytic core GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA integration (GO:0015074))
ACD7_89_2
R_Chlamydiae_27_8, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(527..832)
DNA (306bp) protein (102aa)
transposase is3/is911 family protein
Transposase IS3/ n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZYS1_9BACT (db=UNIREF evalue=5.0e-10 bit_score=66.6 identity=47.3 coverage=71.5686274509804)
seg (db=Seg db_id=seg from=80 to=95)
Transposase_8 (db=HMMPfam db_id=PF01527 from=6 to=50 evalue=1.5e-08 interpro_id=IPR002514 interpro_description=Transposase IS3/IS911 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transposase activity (GO:0004803), Biological Process: transposition, DNA-mediated (GO:0006313))
ACD7_89_3

Not on your lists

comp(902..1093)
DNA (192bp) protein (64aa)
seg (db=Seg db_id=seg from=39 to=52)
Uncharacterized protein {ECO:0000313|EMBL:EKE20980.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD7_89_4

Not on your lists

comp(1242..2117)
DNA (876bp) protein (292aa)
hypothetical protein
alpha/beta-Hydrolases (db=superfamily db_id=SSF53474 from=75 to=280 evalue=1.5e-10)
hypothetical protein alias=ACD7_44539.2112.5_4,ACD7_44539.2112.5G0004,ACD7_C00089G00004 id=130662 tax=ACD7 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=OD1-i organism_desc=OD1-i
Uncharacterized protein {ECO:0000313|EMBL:EKE20981.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 4 items

View Taxonomy