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ACD7_223

Alias: ACD7_55814.4725.5

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD7_223_1

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3..104
DNA (102bp) protein (34aa)
3..104 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKE20867.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD7_223_2

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107..607
DNA (501bp) protein (167aa)
rplS; 50S ribosomal protein L19
seg (db=Seg db_id=seg from=147 to=165)
RIBOSOMAL_L19 (db=PatternScan db_id=PS01015 from=87 to=102 evalue=0.0 interpro_id=IPR018257 interpro_description=Ribosomal protein L19, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
rplS_bact: ribosomal protein L19 (db=HMMTigr db_id=TIGR01024 from=3 to=115 evalue=3.2e-39 interpro_id=IPR001857 interpro_description=Ribosomal protein L19 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD7_223_3

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713..1366
DNA (654bp) protein (218aa)
rnhB; ribonuclease HII (EC:3.1.26.4)
seg (db=Seg db_id=seg from=153 to=162)
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=21 to=216 evalue=5.3e-67 interpro_id=IPR012337 interpro_description=Polynucleotidyl transferase, ribonuclease H fold GO=Molecular Function: nucleic acid binding (GO:0003676))
RIBONUCLEASE HII (db=HMMPanther db_id=PTHR10954 from=22 to=217 evalue=4.7e-56 interpro_id=IPR001352 interpro_description=Ribonuclease HII/HIII GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: ribonuclease H activity (GO:0004523))
ACD7_223_4

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comp(1350..1814)
DNA (465bp) protein (155aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
transmembrane_regions (db=TMHMM db_id=tmhmm from=31 to=50)
seg (db=Seg db_id=seg from=143 to=154)
transmembrane_regions (db=TMHMM db_id=tmhmm from=86 to=108)
ACD7_223_5

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comp(1826..2971)
DNA (1146bp) protein (382aa)
ADP-heptose--LPS heptosyltransferase-like protein
ADP-heptose:LPS heptosyltransferase-like protein n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5G810_GEOUR (db=UNIREF evalue=1.0e-11 bit_score=74.7 identity=28.91 coverage=33.2460732984293)
transmembrane_regions (db=TMHMM db_id=tmhmm from=53 to=75)
seg (db=Seg db_id=seg from=226 to=237)
ACD7_223_6

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3400..4758
DNA (1359bp) protein (453aa)
ribonucleotide-diphosphate reductase subunit alpha
PFL-like glycyl radical enzymes (db=superfamily db_id=SSF51998 from=116 to=450 evalue=8.0e-53)
Ribonuc_red_lgC (db=HMMPfam db_id=PF02867 from=169 to=450 evalue=3.9e-51 interpro_id=IPR000788 interpro_description=Ribonucleotide reductase large subunit, C-terminal GO=Molecular Function: ribonucleoside-diphosphate reductase activity (GO:0004748), Cellular Component: ribonucleoside-diphosphate reductase complex (GO:0005971), Biological Process: DNA replication (GO:0006260))
no description (db=Gene3D db_id=G3DSA:3.20.70.20 from=42 to=405 evalue=1.4e-39)
Displaying 6 items

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