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ACD80_50

Alias: ACD80_38266.5948.19

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD80_50_1
ACD80, SR1, Bacteria

Not on your lists

866..1021
DNA (156bp) protein (52aa)
866..1021 + (rbs_motif=TTGTA rbs_spacer=14bp)
hypothetical protein Tax=ACD80
ACD80_50_2
ACD80, SR1, Bacteria

Not on your lists

1168..1944
DNA (777bp) protein (259aa)
Adenylate cyclase
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=7 to=251 evalue=1.9e-29)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=9 to=227 evalue=2.6e-18)
Methyltransf_12 (db=HMMPfam db_id=PF08242 from=47 to=152 evalue=4.4e-16 interpro_id=IPR013217 interpro_description=Methyltransferase type 12)
ACD80_50_3
ACD80, SR1, Bacteria

Not on your lists

1994..2599
DNA (606bp) protein (202aa)
seg (db=Seg db_id=seg from=24 to=45)
DUF1795 (db=HMMPfam db_id=PF08786 from=96 to=198 evalue=1.0e-08 interpro_id=IPR014894 interpro_description=Protein of unknown function DUF1795)
Mog1p/PsbP-like (db=superfamily db_id=SSF55724 from=86 to=201 evalue=4.0e-08 interpro_id=IPR016124 interpro_description=Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=19 evalue=6.0)
ACD80_50_4
ACD80, SR1, Bacteria

Not on your lists

comp(2509..2985)
DNA (477bp) protein (159aa)
seg (db=Seg db_id=seg from=2 to=14)
transmembrane_regions (db=TMHMM db_id=tmhmm from=127 to=146)
seg 2..14 Tax=ACD80
ACD80_50_5
ACD80, SR1, Bacteria

Not on your lists

comp(3115..3606)
DNA (492bp) protein (164aa)
seg (db=Seg db_id=seg from=4 to=18)
seg 4..18 Tax=ACD80
ACD80_50_6
ACD80, SR1, Bacteria

Not on your lists

comp(3636..4112)
DNA (477bp) protein (159aa)
tRNA/rRNA methyltransferase SpoU
tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PB25_CHIPD (db=UNIREF evalue=7.0e-17 bit_score=89.7 identity=39.19 coverage=87.4213836477987)
alpha/beta knot (db=superfamily db_id=SSF75217 from=2 to=150 evalue=3.0e-26)
SpoU_methylase (db=HMMPfam db_id=PF00588 from=3 to=150 evalue=1.7e-25 interpro_id=IPR001537 interpro_description=tRNA/rRNA methyltransferase, SpoU GO=Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396), Molecular Function: RNA methyltransferase activity (GO:0008173))
ACD80_50_7
ACD80, SR1, Bacteria

Not on your lists

4338..4961
DNA (624bp) protein (208aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=176 to=195)
transmembrane_regions (db=TMHMM db_id=tmhmm from=142 to=161)
seg (db=Seg db_id=seg from=60 to=78)
ACD80_50_8
ACD80, SR1, Bacteria

Not on your lists

5195..5434
DNA (240bp) protein (80aa)
5195..5434 + (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=ACD80
ACD80_50_9
ACD80, SR1, Bacteria

Not on your lists

comp(5513..5986)
DNA (474bp) protein (158aa)
coiled-coil (db=Coil db_id=coil from=56 to=91 evalue=NA)
seg (db=Seg db_id=seg from=37 to=51)
coiled-coil 56..91 Tax=ACD80
Displaying 9 items

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