ggKbase home page

ACD80_63

Alias: ACD80_95612.6066.10

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD80_63_1

Not on your lists

comp(3..251)
DNA (249bp) protein (83aa)
chloride peroxidase
alpha/beta-Hydrolases (db=superfamily db_id=SSF53474 from=13 to=83 evalue=6.9e-15)
no description (db=Gene3D db_id=G3DSA:3.40.50.1820 from=22 to=83 evalue=1.3e-12)
VALACYCLOVIR HYDROLASE (db=HMMPanther db_id=PTHR10992:SF17 from=23 to=78 evalue=2.1e-12)
ACD80_63_2
ACD80, SR1, Bacteria

Not on your lists

826..1125
DNA (300bp) protein (100aa)
seg (db=Seg db_id=seg from=16 to=35)
seg (db=Seg db_id=seg from=74 to=88)
seg 16..35 Tax=ACD80
ACD80_63_3
ACD80, SR1, Bacteria

Not on your lists

1204..1665
DNA (462bp) protein (154aa)
1204..1665 + (rbs_motif=TTAT rbs_spacer=11bp)
hypothetical protein Tax=ACD80
ACD80_63_4
ACD80, SR1, Bacteria

Not on your lists

1704..1844
DNA (141bp) protein (47aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=2 to=19)
transmembrane_regions (db=TMHMM db_id=tmhmm from=24 to=43)
seg (db=Seg db_id=seg from=7 to=18)
seg (db=Seg db_id=seg from=27 to=46)
ACD80_63_5
unknown

Not on your lists

1853..3004
DNA (1152bp) protein (384aa)
Putative uncharacterized protein n=1 Tax=Acinetobacter sp. SH024 RepID=D6JYX9_ACIG3 (db=UNIREF evalue=3.0e-17 bit_score=93.2 identity=24.45 coverage=73.6979166666667)
peptidase M10A and M12B matrixin and adamalysin
seg (db=Seg db_id=seg from=280 to=292)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=37)
ACD80_63_6
unknown

Not on your lists

comp(3029..3433)
DNA (405bp) protein (135aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VLA3_9RHOB (db=UNIREF evalue=4.0e-16 bit_score=86.7 identity=40.21 coverage=69.6296296296296)
transmembrane_regions (db=TMHMM db_id=tmhmm from=11 to=33)
seg (db=Seg db_id=seg from=17 to=35)
ACD80_63_7
unknown

Not on your lists

comp(3608..4432)
DNA (825bp) protein (275aa)
TRNA ligase n=1 Tax=Prochlorococcus phage P-SSM2 RepID=Q58MF6_BPPRM (db=UNIREF evalue=2.0e-69 bit_score=266.0 identity=57.37 coverage=88.3636363636364)
Class II aaRS and biotin synthetases (db=superfamily db_id=SSF55681 from=9 to=274 evalue=4.3e-18)
tRNA-synt_2 (db=HMMPfam db_id=PF00152 from=10 to=272 evalue=1.0e-16 interpro_id=IPR004364 interpro_description=Aminoacyl-tRNA synthetase, class II (D/K/N) GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: aminoacyl-tRNA ligase activity (GO:0004812), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: tRNA aminoacylation for protein translation (GO:0006418))
no description (db=Gene3D db_id=G3DSA:3.30.930.10 from=10 to=274 evalue=1.8e-14)
ACD80_63_8
ACD80, SR1, Bacteria

Not on your lists

comp(4542..4805)
DNA (264bp) protein (88aa)
4542..4805 - (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=ACD80
ACD80_63_9
ACD80, SR1, Bacteria

Not on your lists

comp(4783..5655)
DNA (873bp) protein (291aa)
seg (db=Seg db_id=seg from=41 to=55)
seg (db=Seg db_id=seg from=140 to=156)
seg 41..55 Tax=ACD80
ACD80_63_10
ACD80, SR1, Bacteria

Not on your lists

comp(5750..5995)
DNA (246bp) protein (82aa)
excinuclease ABC subunit C domain-containing protein
seg (db=Seg db_id=seg from=61 to=77)
GIY-YIG (db=HMMPfam db_id=PF01541 from=3 to=72 evalue=1.2e-08 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281))
GIY-YIG endonuclease (db=superfamily db_id=SSF82771 from=1 to=73 evalue=7.7e-08 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281))
Displaying 10 items

View Taxonomy