Alias: ACD80_379.11428.20
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
ACD80_75_1
ACD80, SR1, Bacteria
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Not on your lists |
comp(97..483)
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97..483 - (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=ACD80
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ACD80_75_2
unknown
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Not on your lists |
817..1434
|
50S ribosomal protein L10
50S ribosomal protein L10 n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EBE3_9CLOT (db=UNIREF evalue=2.0e-13 bit_score=79.0 identity=31.87 coverage=75.2427184466019)
seg (db=Seg db_id=seg from=170 to=200)
Ribosomal_L10 (db=HMMPfam db_id=PF00466 from=4 to=100 evalue=8.9e-12 interpro_id=IPR001790 interpro_description=Ribosomal protein L10 GO=Cellular Component: intracellular (GO:0005622), Biological Process: ribosome biogenesis (GO:0042254))
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ACD80_75_3
unknown
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Not on your lists |
1535..1921
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rplL; 50S ribosomal protein L7/L12
50S ribosomal protein L7/L12 n=1 Tax=Oribacterium sinus F0268 RepID=C2KXN3_9FIRM (db=UNIREF evalue=2.0e-10 bit_score=68.2 identity=62.61 coverage=88.3720930232558)
seg (db=Seg db_id=seg from=78 to=92)
seg (db=Seg db_id=seg from=34 to=59)
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ACD80_75_4
ACD80, SR1, Bacteria
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Not on your lists |
2031..2696
|
hypothetical protein
RIBOSOMAL_S2_1 (db=PatternScan db_id=PS00962 from=5 to=16 evalue=0.0 interpro_id=IPR018130 interpro_description=Ribosomal protein S2, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal protein S2 (db=superfamily db_id=SSF52313 from=5 to=220 evalue=5.4e-33 interpro_id=IPR001865 interpro_description=Ribosomal protein S2 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_S2 (db=HMMPfam db_id=PF00318 from=9 to=220 evalue=9.4e-31 interpro_id=IPR001865 interpro_description=Ribosomal protein S2 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD80_75_5
ACD80, SR1, Bacteria
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Not on your lists |
2742..3197
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=34 to=51)
transmembrane_regions (db=TMHMM db_id=tmhmm from=64 to=86)
transmembrane_regions (db=TMHMM db_id=tmhmm from=90 to=109)
transmembrane_regions 34..51 Tax=ACD80
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ACD80_75_6
ACD80, SR1, Bacteria
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Not on your lists |
3282..4082
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hypothetical protein
coiled-coil (db=Coil db_id=coil from=18 to=39 evalue=NA)
EF_TS (db=HMMPfam db_id=PF00889 from=55 to=263 evalue=2.6e-51 interpro_id=IPR014039 interpro_description=Translation elongation factor EFTs/EF1B, dimerisation GO=Molecular Function: translation elongation factor activity (GO:0003746), Cellular Component: intracellular (GO:0005622), Biological Process: translational elongation (GO:0006414))
ELONGATION FACTOR TS (db=HMMPanther db_id=PTHR11741 from=5 to=264 evalue=2.0e-46 interpro_id=IPR001816 interpro_description=Translation elongation factor EFTs/EF1B GO=Molecular Function: translation elongation factor activity (GO:0003746), Cellular Component: intracellular (GO:0005622), Biological Process: translational elongation (GO:0006414))
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ACD80_75_7
ACD80, SR1, Bacteria
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Not on your lists |
4134..4700
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Ribosomal protein S6 (db=superfamily db_id=SSF54995 from=1 to=98 evalue=1.1e-11 interpro_id=IPR000529 interpro_description=Ribosomal protein S6 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
Ribosomal_S6 (db=HMMPfam db_id=PF01250 from=3 to=92 evalue=9.9e-10 interpro_id=IPR000529 interpro_description=Ribosomal protein S6 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
Ribosomal_S18 (db=HMMPfam db_id=PF01084 from=134 to=184 evalue=1.1e-09 interpro_id=IPR001648 interpro_description=Ribosomal protein S18 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal protein S18 (db=superfamily db_id=SSF46911 from=111 to=187 evalue=8.8e-09 interpro_id=IPR001648 interpro_description=Ribosomal protein S18 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD80_75_8
ACD80, SR1, Bacteria
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Not on your lists |
4750..4905
|
Ribosomal_L34 (db=HMMPfam db_id=PF00468 from=11 to=47 evalue=6.9e-12 interpro_id=IPR000271 interpro_description=Ribosomal protein L34 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
rpmH_bact: ribosomal protein L34 (db=HMMTigr db_id=TIGR01030 from=5 to=48 evalue=6.0e-09 interpro_id=IPR000271 interpro_description=Ribosomal protein L34 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
RL34_METCA_Q602M9; (db=BlastProDom db_id=PD003101 from=5 to=46 evalue=0.0006 interpro_id=IPR000271 interpro_description=Ribosomal protein L34 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_L34 (db=HAMAP db_id=MF_00391 from=5 to=48 evalue=11.832)
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ACD80_75_9
ACD80, SR1, Bacteria
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Not on your lists |
5005..8904
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hypothetical protein
hypothetical protein
DNA-directed RNA polymerase subunit beta n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=RPOB_SYNWW (db=UNIREF evalue=0.0 bit_score=871.0 identity=42.16 coverage=80.0769230769231)
seg (db=Seg db_id=seg from=51 to=80)
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ACD80_75_10
ACD80, SR1, Bacteria
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Not on your lists |
9010..11466
|
hypothetical protein
hypothetical protein
DNA-directed RNA polymerase subunit beta' n=5 Tax=Dehalococcoides RepID=RPOC_DEHSC (db=UNIREF evalue=3.0e-167 bit_score=592.0 identity=40.07 coverage=96.0927960927961)
seg (db=Seg db_id=seg from=92 to=103)
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