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ACD81_19

Alias: ACD81_499.6299.26

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD81_19_1
GWC2_OD1_ACD81_39_22, Wolfebacteria, Parcubacteria, Bacteria

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1..228
-----------------
DNA (228bp)
protein (76aa)
1..228 + (rbs_motif=None rbs_spacer=None)
Extracellular ligand-binding receptor {ECO:0000313|EMBL:KKR12280.1}; TaxID=1619013 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWC2_39_22.;"
ACD81_19_2
GWC2_OD1_ACD81_39_22, Wolfebacteria, Parcubacteria, Bacteria

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comp(281..1018)
-----------------
DNA (738bp)
protein (246aa)
Transcriptional regulator, TrmB
TrmB (db=HMMPfam db_id=PF01978 from=7 to=71 evalue=4.0e-16 interpro_id=IPR002831 interpro_description=Transcription regulator TrmB, N-terminal)
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=8 to=104 evalue=2.4e-09)
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=2 to=96 evalue=0.00023 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding)
ACD81_19_3
GWC2_OD1_ACD81_39_22, Wolfebacteria, Parcubacteria, Bacteria

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1210..1869
-----------------
DNA (660bp)
protein (220aa)
methylase
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=25 to=216 evalue=4.9e-34)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=7 to=206 evalue=5.1e-27)
METHYLTRANSFERASE (db=HMMPanther db_id=PTHR18895 from=43 to=219 evalue=2.5e-23)
ACD81_19_4
GWC2_OD1_ACD81_39_22, Wolfebacteria, Parcubacteria, Bacteria

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1890..2981
-----------------
DNA (1092bp)
protein (364aa)
putative substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein (db=KEGG evalue=6.0e-18 bit_score=95.5 identity=28.25 coverage=91.4835164835165)
seg (db=Seg db_id=seg from=3 to=17)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
Periplasmic binding protein-like I (db=superfamily db_id=SSF53822 from=29 to=362 evalue=5.7e-42)
ACD81_19_5
GWC2_OD1_ACD81_39_22, Wolfebacteria, Parcubacteria, Bacteria

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3058..3819
-----------------
DNA (762bp)
protein (254aa)
Transcriptional regulator, TrmB n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DGB2_9EURY (db=UNIREF evalue=5.0e-10 bit_score=68.2 identity=26.44 coverage=93.7007874015748)
TrmB (db=HMMPfam db_id=PF01978 from=12 to=73 evalue=4.2e-10 interpro_id=IPR002831 interpro_description=Transcription regulator TrmB, N-terminal)
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=11 to=116 evalue=6.7e-06)
Putative uncharacterized protein Tax=GWC2_OD1_ACD81_39_22
ACD81_19_6
GWC2_OD1_ACD81_39_22, Wolfebacteria, Parcubacteria, Bacteria

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3925..5061
-----------------
DNA (1137bp)
protein (379aa)
Extracellular ligand-binding receptor
Extracellular ligand-binding receptor n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GH32_9FIRM (db=UNIREF evalue=1.0e-27 bit_score=128.0 identity=30.38 coverage=87.598944591029)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
seg (db=Seg db_id=seg from=261 to=273)
ACD81_19_7
GWC2_OD1_ACD81_39_22, Wolfebacteria, Parcubacteria, Bacteria

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5123..5869
-----------------
DNA (747bp)
protein (249aa)
HAAT family amino acid/amide ABC transporter ATP-binding protein 2
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=140 to=154 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=7 to=237 evalue=7.0e-88)
BRANCHED CHAIN AMINO ACID ABC TRANSPORTER (db=HMMPanther db_id=PTHR19222:SF13 from=7 to=237 evalue=7.0e-88)
ACD81_19_8
GWC2_OD1_ACD81_39_22, Wolfebacteria, Parcubacteria, Bacteria

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5969..6316
-----------------
DNA (348bp)
protein (116aa)
seg (db=Seg db_id=seg from=4 to=34)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=23)
Tax=GWC2_OD1_ACD81_39_22
Displaying 8 items

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