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ACD87_34

Alias: ACD87_11571.5520.28

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD87_34_1

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comp(1..240)
DNA (240bp) protein (80aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=55 to=74)
Uncharacterized protein {ECO:0000313|EMBL:EKD22412.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD87_34_2

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comp(237..1109)
DNA (873bp) protein (291aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GWN7_9DELT (db=UNIREF evalue=1.0e-59 bit_score=233.0 identity=45.32 coverage=94.5017182130584)
Uncharacterized protein {ECO:0000313|EMBL:EKD22413.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD87_34_3

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comp(1447..2208)
DNA (762bp) protein (254aa)
ISChy4, transposition helper protein
seg (db=Seg db_id=seg from=44 to=55)
coiled-coil (db=Coil db_id=coil from=29 to=50 evalue=NA)
IstB (db=HMMPfam db_id=PF01695 from=57 to=235 evalue=2.3e-48 interpro_id=IPR002611 interpro_description=IstB-like ATP-binding protein GO=Molecular Function: ATP binding (GO:0005524))
ACD87_34_4

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comp(2205..3683)
DNA (1479bp) protein (493aa)
istA5; protein IstA5
IstA3 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QEZ0_DESAH (db=UNIREF evalue=6.0e-61 bit_score=239.0 identity=33.55 coverage=93.1034482758621)
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=115 to=291 evalue=2.9e-17 interpro_id=IPR012337 interpro_description=Polynucleotidyl transferase, ribonuclease H fold GO=Molecular Function: nucleic acid binding (GO:0003676))
rve (db=HMMPfam db_id=PF00665 from=115 to=242 evalue=1.6e-16 interpro_id=IPR001584 interpro_description=Integrase, catalytic core GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA integration (GO:0015074))
ACD87_34_5

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comp(3680..4096)
DNA (417bp) protein (139aa)
hypothetical protein (db=KEGG evalue=2.0e-12 bit_score=74.3 identity=36.54 coverage=74.1007194244604)
Uncharacterized protein {ECO:0000313|EMBL:EKD22410.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Conserved domain protein n=21 Tax=delta proteobacterium NaphS2 RepID=D8FBY6_9DELT
ACD87_34_6

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comp(4178..4642)
DNA (465bp) protein (155aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NYE2_9DELT (db=UNIREF evalue=8.0e-16 bit_score=85.9 identity=39.1 coverage=95.4838709677419)
seg (db=Seg db_id=seg from=80 to=104)
Uncharacterized protein {ECO:0000313|EMBL:EKD22411.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD87_34_7

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5261..5485
DNA (225bp) protein (75aa)
Transcriptional regulator, AbrB family n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5G6B7_GEOUR (db=UNIREF evalue=1.0e-17 bit_score=91.7 identity=58.9 coverage=96.0)
AbrB family transcriptional regulator
AbrB/MazE/MraZ-like (db=superfamily db_id=SSF89447 from=1 to=44 evalue=7.9e-08)
SpoVT_AbrB (db=HMMPfam db_id=PF04014 from=2 to=41 evalue=2.3e-07 interpro_id=IPR007159 interpro_description=Transcription regulator AbrB/SpoV, predicted)
ACD87_34_8

Not on your lists

5489..5572
DNA (84bp) protein (28aa)
5489..5572 + (rbs_motif=GGAG/GAGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD22407.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 8 items

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