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ACD87_70

Alias: ACD87_5882.3513.12

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD87_70_1
GWC2_Syntrophus_56_31_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(43..732)
DNA (690bp) protein (230aa)
DNA repair protein
DNA repair protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LSS5_SYNAS (db=UNIREF evalue=1.0e-77 bit_score=292.0 identity=63.47 coverage=94.7826086956522)
seg (db=Seg db_id=seg from=164 to=176)
UPF0758 (db=PatternScan db_id=PS01302 from=177 to=182 evalue=0.0 interpro_id=IPR020891 interpro_description=Uncharacterised protein family, RadC-like, conserved site)
ACD87_70_2
GWC2_Syntrophus_56_31_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(801..989)
DNA (189bp) protein (63aa)
seg (db=Seg db_id=seg from=11 to=21)
transmembrane_regions (db=TMHMM db_id=tmhmm from=31 to=53)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=26)
DUF2892 (db=HMMPfam db_id=PF11127 from=1 to=60 evalue=7.6e-20 interpro_id=IPR021309 interpro_description=Protein of unknown function DUF2892)
ACD87_70_3
GWC2_Syntrophus_56_31_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1025..1933)
DNA (909bp) protein (303aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=123 to=142)
transmembrane_regions (db=TMHMM db_id=tmhmm from=157 to=176)
transmembrane_regions (db=TMHMM db_id=tmhmm from=189 to=211)
transmembrane_regions (db=TMHMM db_id=tmhmm from=221 to=243)
ACD87_70_4

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2045..3031
DNA (987bp) protein (329aa)
putative esterase of the alpha-beta hydrolase superfamily
FabD/lysophospholipase-like (db=superfamily db_id=SSF52151 from=20 to=314 evalue=1.9e-54 interpro_id=IPR016035 interpro_description=Acyl transferase/acyl hydrolase/lysophospholipase GO=Biological Process: metabolic process (GO:0008152))
NEUROPATHY TARGET ESTERASE/SWISS CHEESE(D.MELANOGASTER) (db=HMMPanther db_id=PTHR14226 from=22 to=199 evalue=8.5e-24)
Patatin (db=HMMPfam db_id=PF01734 from=25 to=181 evalue=8.2e-20 interpro_id=IPR002641 interpro_description=Patatin GO=Biological Process: lipid metabolic process (GO:0006629))
ACD87_70_5
GWC2_Syntrophus_56_31_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3134..3550
DNA (417bp) protein (139aa)
TetR family transcriptional regulator
Transcriptional regulator, TetR family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A6H4_NATTJ (db=UNIREF evalue=6.0e-11 bit_score=69.7 identity=30.56 coverage=76.2589928057554)
coiled-coil (db=Coil db_id=coil from=1 to=22 evalue=NA)
Homeodomain-like (db=superfamily db_id=SSF46689 from=2 to=90 evalue=1.8e-17 interpro_id=IPR009057 interpro_description=Homeodomain-like)
Displaying 5 items

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