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ACD9_45

Alias: ACD9_17705.8239.9

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD9_45_1

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2..730
DNA (729bp) protein (243aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=219 to=241)
transmembrane_regions (db=TMHMM db_id=tmhmm from=185 to=207)
transmembrane_regions (db=TMHMM db_id=tmhmm from=156 to=175)
transmembrane_regions (db=TMHMM db_id=tmhmm from=117 to=136)
ACD9_45_2

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748..1833
DNA (1086bp) protein (362aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=31 to=53)
seg (db=Seg db_id=seg from=31 to=45)
(Trans)glycosidases (db=superfamily db_id=SSF51445 from=85 to=343 evalue=5.0e-26 interpro_id=IPR017853 interpro_description=Glycoside hydrolase, catalytic core)
no description (db=Gene3D db_id=G3DSA:3.20.20.80 from=61 to=191 evalue=2.4e-07 interpro_id=IPR013781 interpro_description=Glycoside hydrolase, subgroup, catalytic core GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: carbohydrate metabolic process (GO:0005975), Molecular Function: cation binding (GO:0043169))
ACD9_45_3

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1847..2995
DNA (1149bp) protein (383aa)
ErfK/YbiS/YcfS/YnhG family protein
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CDF9_THET1 (db=UNIREF evalue=9.0e-12 bit_score=75.1 identity=33.33 coverage=31.331592689295)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
seg (db=Seg db_id=seg from=15 to=29)
ACD9_45_4

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3054..4505
DNA (1452bp) protein (484aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=450 to=472)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
seg (db=Seg db_id=seg from=335 to=352)
seg (db=Seg db_id=seg from=240 to=254)
ACD9_45_5

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4489..5868
DNA (1380bp) protein (460aa)
two-component sensor histidine kinase
transmembrane_regions (db=TMHMM db_id=tmhmm from=18 to=40)
seg (db=Seg db_id=seg from=22 to=34)
seg (db=Seg db_id=seg from=168 to=187)
ACD9_45_6

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6043..6762
DNA (720bp) protein (240aa)
hypothetical protein
HAD-like (db=superfamily db_id=SSF56784 from=4 to=235 evalue=5.9e-20)
HAD-SF-IB: HAD phosphoserine phosphatase-li (db=HMMTigr db_id=TIGR01488 from=7 to=196 evalue=6.0e-20 interpro_id=IPR006383 interpro_description=HAD-superfamily hydrolase, subfamily IB, PSPase-like GO=Biological Process: metabolic process (GO:0008152), Molecular Function: phosphatase activity (GO:0016791))
PHOSPHOSERINE PHOSPHATASE (db=HMMPanther db_id=PTHR10000 from=99 to=219 evalue=8.0e-13)
ACD9_45_7

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6791..6979
DNA (189bp) protein (63aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
seg (db=Seg db_id=seg from=3 to=21)
Uncharacterized protein {ECO:0000313|EMBL:EKE19264.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD9_45_8

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comp(7082..7426)
DNA (345bp) protein (115aa)
rplT; 50S ribosomal protein L20
RIBOSOMAL_L20 (db=PatternScan db_id=PS00937 from=54 to=70 evalue=0.0 interpro_id=IPR005813 interpro_description=Ribosomal protein L20 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
rplT_bact: ribosomal protein L20 (db=HMMTigr db_id=TIGR01032 from=1 to=114 evalue=9.0e-43 interpro_id=IPR005813 interpro_description=Ribosomal protein L20 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
Ribosomal_L20 (db=HMMPfam db_id=PF00453 from=3 to=108 evalue=1.0e-36 interpro_id=IPR005813 interpro_description=Ribosomal protein L20 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
ACD9_45_9

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comp(7496..7702)
DNA (207bp) protein (69aa)
L35p-like (db=superfamily db_id=SSF143034 from=2 to=65 evalue=2.3e-14)
rpmI_bact: ribosomal protein L35 (db=HMMTigr db_id=TIGR00001 from=2 to=64 evalue=4.4e-12 interpro_id=IPR001706 interpro_description=Ribosomal protein L35, non-mitochondrial GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_L35p (db=HMMPfam db_id=PF01632 from=2 to=61 evalue=9.5e-11 interpro_id=IPR021137 interpro_description=Ribosomal protein L35 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
RIBOSOMALL35 (db=FPrintScan db_id=PR00064 from=21 to=35 evalue=2.1e-05 interpro_id=IPR001706 interpro_description=Ribosomal protein L35, non-mitochondrial GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD9_45_10

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comp(7810..8277)
DNA (468bp) protein (156aa)
infC; translation initiation factor IF-3
seg (db=Seg db_id=seg from=58 to=69)
infC: translation initiation factor IF-3 (db=HMMTigr db_id=TIGR00168 from=1 to=153 evalue=4.4e-35 interpro_id=IPR001288 interpro_description=Translation initiation factor 3 GO=Molecular Function: translation initiation factor activity (GO:0003743), Biological Process: translational initiation (GO:0006413))
TRANSLATION INITIATION FACTOR IF-3 (db=HMMPanther db_id=PTHR10938 from=5 to=150 evalue=1.6e-33 interpro_id=IPR001288 interpro_description=Translation initiation factor 3 GO=Molecular Function: translation initiation factor activity (GO:0003743), Biological Process: translational initiation (GO:0006413))
Displaying 10 items

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