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ACD9_57

Alias: ACD9_39401.3876.9

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD9_57_1

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comp(204..365)
DNA (162bp) protein (54aa)
seg (db=Seg db_id=seg from=30 to=47)
coiled-coil (db=Coil db_id=coil from=15 to=36 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:EKE18855.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD9_57_2

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comp(382..1026)
DNA (645bp) protein (215aa)
seg (db=Seg db_id=seg from=2 to=19)
seg (db=Seg db_id=seg from=37 to=48)
transmembrane_regions (db=TMHMM db_id=tmhmm from=37 to=56)
Uncharacterized protein {ECO:0000313|EMBL:EKE18856.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD9_57_3

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1289..1762
DNA (474bp) protein (158aa)
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=11 to=146 evalue=1.4e-19)
no description (db=HMMSmart db_id=SM00347 from=28 to=130 evalue=1.7e-10 interpro_id=IPR000835 interpro_description=HTH transcriptional regulator, MarR GO=Molecular Function: transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=35 to=110 evalue=3.5e-08 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding)
HTH_5 (db=HMMPfam db_id=PF01022 from=41 to=81 evalue=1.7e-05 interpro_id=IPR001845 interpro_description=HTH transcriptional regulator, ArsR GO=Molecular Function: transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
ACD9_57_4

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1771..2880
DNA (1110bp) protein (370aa)
RND family efflux transporter MFP subunit
RND family efflux system membrane fusion protein n=1 Tax=Idiomarina loihiensis RepID=Q5QWY5_IDILO (db=UNIREF evalue=6.0e-18 bit_score=95.5 identity=25.83 coverage=77.5675675675676)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=21)
seg (db=Seg db_id=seg from=11 to=21)
ACD9_57_5

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2927..3910
DNA (984bp) protein (328aa)
acriflavin resistance protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=33 to=55)
seg (db=Seg db_id=seg from=40 to=48)
ACR_tran (db=HMMPfam db_id=PF00873 from=32 to=327 evalue=2.5e-60 interpro_id=IPR001036 interpro_description=Acriflavin resistance protein GO=Molecular Function: transporter activity (GO:0005215), Biological Process: transport (GO:0006810), Cellular Component: membrane (GO:0016020))
Displaying 5 items

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