ggKbase home page

ACD9_202

Alias: ACD9p_101764.10147.7

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD9_202_1
GWC2_OD1-i_37_82, Moranbacteria, Parcubacteria, Bacteria

Not on your lists


comp(2..1081)
DNA (1080bp) protein (360aa)
alanine--tRNA ligase (EC:6.1.1.7)
alanine--tRNA ligase (EC:6.1.1.7)
(db=HMMPfam db_id=PF01411 from=5 to=356 evalue=1.8e-92 interpro_id=IPR018164 interpro_description=Alanyl-tRNA synthetase, class IIc, N-terminal GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: alanine-tRNA ligase activity (GO:0004813), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: alanyl-tRNA aminoacylation (GO:0006419))
ACD9_202_2
GWD2_OD1_38_7, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(1125..1346)
DNA (222bp) protein (74aa)
1125..1346 - ( gc_cont=0.320)
Uncharacterized protein {ECO:0000313|EMBL:KKQ80176.1}; TaxID=1618706 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWD2_38_7.;"
ACD9_202_3
GWC1_OD1_38_22, Parcubacteria, Bacteria

Not on your lists

comp(1376..1636)
DNA (261bp) protein (87aa)
coiled-coil (db=Coil db_id=coil from=60 to=81 evalue=NA)
coiled-coil (db=Coil db_id=coil from=25 to=46 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:KKQ62730.1}; TaxID=1618897 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_38_22.;"
ACD9_202_4

Not on your lists

comp(1710..2816)
DNA (1107bp) protein (369aa)
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
trmU: tRNA (5-methylaminomethyl-2-thiouridyl (db=HMMTigr db_id=TIGR00420 from=8 to=367 evalue=1.0e-138 interpro_id=IPR004506 interpro_description=tRNA-specific 2-thiouridylase GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: tRNA processing (GO:0008033), Molecular Function: transferase activity (GO:0016740))
(db=HMMPfam db_id=PF03054 from=8 to=367 evalue=6.8e-122 interpro_id=IPR004506 interpro_description=tRNA-specific 2-thiouridylase GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: tRNA processing (GO:0008033), Molecular Function: transferase activity (GO:0016740))
TRNA (5-METHYLAMINOMETHYL-2-THIOURIDYLATE)-METHYLTRANSFERASE (db=HMMPanther db_id=PTHR11933 from=23 to=368 evalue=6.0e-121 interpro_id=IPR004506 interpro_description=tRNA-specific 2-thiouridylase GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: tRNA processing (GO:0008033), Molecular Function: transferase activity (GO:0016740))
ACD9_202_5
GWC1_OD1_38_22, Parcubacteria, Bacteria

Not on your lists

comp(2864..3574)
DNA (711bp) protein (237aa)
putative uncharacterized protein
DHS-like NAD/FAD-binding domain (db=superfamily db_id=SSF52467 from=43 to=236 evalue=8.3e-21)
no description (db=Gene3D db_id=G3DSA:3.40.50.1220 from=45 to=236 evalue=9.7e-10)
(db=HMMPfam db_id=PF02146 from=64 to=156 evalue=3.0e-07 interpro_id=IPR003000 interpro_description=NAD-dependent histone deacetylase, silent information regulator Sir2 GO=Biological Process: chromatin silencing (GO:0006342), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Biological Process: protein deacetylation (GO:0006476), Molecular Function: zinc ion binding (GO:0008270), Molecular Function: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear a
ACD9_202_6
GWC1_OD1_38_22, Parcubacteria, Bacteria

Not on your lists

comp(3691..4083)
DNA (393bp) protein (131aa)
seg (db=Seg db_id=seg from=98 to=113)
Tax=GWC1_OD1_38_22
ACD9_202_7
GWC1_OD1_38_22, Parcubacteria, Bacteria

Not on your lists

comp(4106..4951)
DNA (846bp) protein (282aa)
hypothetical protein
hypothetical protein
seg (db=Seg db_id=seg from=239 to=250)
ACD9_202_8
GWC1_OD1_38_22, Parcubacteria, Bacteria

Not on your lists

comp(5052..5633)
DNA (582bp) protein (194aa)
phosphatase
HAD-like (db=superfamily db_id=SSF56784 from=1 to=193 evalue=5.4e-27 interpro_id=IPR023214 interpro_description=HAD-like domain)
no description (db=Gene3D db_id=G3DSA:3.40.50.1000 from=1 to=190 evalue=1.8e-10 interpro_id=IPR023214 interpro_description=HAD-like domain)
HAD-SF-IA-v3: HAD hydrolase, family IA, (db=HMMTigr db_id=TIGR01509 from=3 to=161 evalue=5.5e-05 interpro_id=IPR006402 interpro_description=HAD-superfamily hydrolase, subfamily IA, variant 3 GO=Molecular Function: hydrolase activity (GO:0016787))
ACD9_202_9
GWC1_OD1_38_22, Parcubacteria, Bacteria

Not on your lists

comp(5723..6670)
DNA (948bp) protein (316aa)
ABC transporter-related protein
seg (db=Seg db_id=seg from=214 to=229)
seg (db=Seg db_id=seg from=24 to=35)
seg (db=Seg db_id=seg from=116 to=128)
ACD9_202_10
GWC1_OD1_38_22, Parcubacteria, Bacteria

Not on your lists

comp(7564..8313)
DNA (750bp) protein (250aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WGE1_9SPHN (db=UNIREF evalue=1.0e-26 bit_score=124.0 identity=40.88 coverage=54.8)
seg (db=Seg db_id=seg from=236 to=249)
Uncharacterized protein {ECO:0000313|EMBL:KKQ62736.1}; TaxID=1618897 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_38_22.;"
ACD9_202_11
GWC1_OD1_38_22, Parcubacteria, Bacteria

Not on your lists

comp(9463..10179)
DNA (717bp) protein (239aa)
coiled-coil (db=Coil db_id=coil from=118 to=143 evalue=NA)
seg (db=Seg db_id=seg from=20 to=37)
seg (db=Seg db_id=seg from=127 to=140)
seg (db=Seg db_id=seg from=143 to=169)
Displaying 11 items

View Taxonomy