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ACD18_10

Alias: ACD18_2235.12250.23

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD18_10_1
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

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comp(2..964)
DNA (963bp) protein (321aa)
recA; multifunctional SOS repair factor
recA; multifunctional SOS repair factor
recA protein n=1 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI000174277A (db=UNIREF evalue=4.0e-106 bit_score=388.0 identity=66.35 coverage=98.4423676012461)
seg (db=Seg db_id=seg from=245 to=256)
ACD18_10_2
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

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1147..1758
DNA (612bp) protein (204aa)
HAD-superfamily hydrolase, subfamily IA, variant 1
HAD-like (db=superfamily db_id=SSF56784 from=1 to=203 evalue=4.9e-40)
no description (db=Gene3D db_id=G3DSA:3.40.50.1000 from=3 to=203 evalue=6.0e-17)
Hydrolase (db=HMMPfam db_id=PF00702 from=3 to=168 evalue=4.7e-10 interpro_id=IPR005834 interpro_description=Haloacid dehalogenase-like hydrolase GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
ACD18_10_3

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1764..2375
DNA (612bp) protein (204aa)
phosphohydrolase
Metal dependent phosphohydrolase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3X2_DESAC (db=UNIREF evalue=9.0e-27 bit_score=123.0 identity=38.1 coverage=86.7647058823529)
HD-domain/PDEase-like (db=superfamily db_id=SSF109604 from=9 to=195 evalue=2.5e-27)
no description (db=Gene3D db_id=G3DSA:1.10.3210.10 from=1 to=195 evalue=3.6e-25)
ACD18_10_4
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

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2377..2943
DNA (567bp) protein (189aa)
Putative uncharacterized protein n=1 Tax=Bacillus cereus R309803 RepID=C2QCZ2_BACCE (db=UNIREF evalue=4.0e-61 bit_score=236.0 identity=61.62 coverage=97.3544973544974)
hypothetical protein
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=1 to=146 evalue=2.0e-12)
hypothetical protein Tax=RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated
ACD18_10_5
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

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2945..3286
DNA (342bp) protein (114aa)
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase (EC:5.3.1.8)
MannoseP_isomer (db=HMMPfam db_id=PF01050 from=7 to=108 evalue=3.5e-25 interpro_id=IPR001538 interpro_description=Mannose-6-phosphate isomerase, type II, C-terminal GO=Biological Process: polysaccharide metabolic process (GO:0005976), Molecular Function: nucleotidyltransferase activity (GO:0016779))
RmlC-like cupins (db=superfamily db_id=SSF51182 from=2 to=113 evalue=1.0e-22 interpro_id=IPR011051 interpro_description=Cupin, RmlC-type)
MANNOSE-1-PHOSPHATE GUANYLYLTRANSFERASE (db=HMMPanther db_id=PTHR12526:SF1 from=8 to=104 evalue=6.3e-16)
ACD18_10_6

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comp(3338..4036)
DNA (699bp) protein (233aa)
ymfM; hypothetical protein (db=KEGG evalue=4.0e-09 bit_score=65.1 identity=47.14 coverage=29.1845493562232)
seg (db=Seg db_id=seg from=119 to=135)
transmembrane_regions (db=TMHMM db_id=tmhmm from=115 to=137)
Uncharacterized protein {ECO:0000313|EMBL:EKE07239.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD18_10_7
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

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comp(4043..5977)
DNA (1935bp) protein (645aa)
SpoIID/LytB domain protein; K06381 stage II sporulation protein D (db=KEGG evalue=4.0e-10 bit_score=70.5 identity=33.54 coverage=24.1860465116279)
seg (db=Seg db_id=seg from=167 to=201)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=243 to=261)
ACD18_10_8
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

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6280..7701
DNA (1422bp) protein (474aa)
heteropolysaccharide repeat-containing protein
Lipopolysaccharide O-side chain biosynthesis protein (O-antigen transpoter) n=1 Tax=Methanosarcina barkeri str. Fusaro RepID=Q46FX4_METBF (db=UNIREF evalue=1.0e-24 bit_score=118.0 identity=25.74 coverage=98.1012658227848)
transmembrane_regions (db=TMHMM db_id=tmhmm from=254 to=276)
transmembrane_regions (db=TMHMM db_id=tmhmm from=297 to=319)
ACD18_10_9

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comp(7861..9150)
DNA (1290bp) protein (430aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=145 to=167)
transmembrane_regions (db=TMHMM db_id=tmhmm from=182 to=204)
transmembrane_regions (db=TMHMM db_id=tmhmm from=217 to=234)
transmembrane_regions (db=TMHMM db_id=tmhmm from=238 to=255)
ACD18_10_10
RifOxyC12_full_OD1_Magasanikbacteria_33_11_curated, Magasanikbacteria, Parcubacteria, Bacteria

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9520..10011
DNA (492bp) protein (164aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
transmembrane_regions 10..32 Tax=RifOxyC12_full_OD1_Magasanikbacteria_33_11_curated
ACD18_10_11
RifOxyC12_full_OD1_Magasanikbacteria_33_11_curated, Magasanikbacteria, Parcubacteria, Bacteria

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10078..10584
DNA (507bp) protein (169aa)
seg (db=Seg db_id=seg from=81 to=95)
seg (db=Seg db_id=seg from=105 to=124)
seg 81..95 Tax=RifOxyC12_full_OD1_Magasanikbacteria_33_11_curated
ACD18_10_12
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

10589..11053
DNA (465bp) protein (155aa)
GCN5-related N-acetyltransferase
Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FUK8_9CLOT (db=UNIREF evalue=4.0e-17 bit_score=90.1 identity=34.64 coverage=96.7741935483871)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=1 to=153 evalue=1.9e-30 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
no description (db=Gene3D db_id=G3DSA:3.40.630.30 from=1 to=153 evalue=7.3e-20 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
may be diamine N-acetyltransferase Jill Banfield (11/15/12)
ACD18_10_13
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

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11061..11729
DNA (669bp) protein (223aa)
type 11 methyltransferase
RRNA_A_DIMETH (db=PatternScan db_id=PS01131 from=36 to=64 evalue=0.0 interpro_id=IPR020596 interpro_description=Ribosomal RNA adenine methylase transferase, conserved site GO=Biological Process: rRNA modification (GO:0000154), Molecular Function: rRNA (adenine-N6,N6-)-dimethyltransferase activity (GO:0000179), Molecular Function: rRNA methyltransferase activity (GO:0008649))
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=1 to=190 evalue=9.1e-30)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=33 to=184 evalue=1.5e-19)
ACD18_10_14

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11869..12288
DNA (420bp) protein (140aa)
Putative transposase for IS1016 n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1UC35_9DELT (db=UNIREF evalue=3.0e-15 bit_score=84.3 identity=35.25 coverage=95.7142857142857)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKE07233.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 14 items

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