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ACD18_128

Alias: ACD18_10851.6655.21

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD18_128_1

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1..510
DNA (510bp) protein (170aa)
ATPase AAA
WERNER HELICASE INTERACTING PROTEIN (db=HMMPanther db_id=PTHR13779:SF1 from=1 to=169 evalue=3.5e-86)
HOLLIDAY JUNCTION DNA HELICASE RUVB-RELATED (db=HMMPanther db_id=PTHR13779 from=1 to=169 evalue=3.5e-86)
MgsA_C (db=HMMPfam db_id=PF12002 from=22 to=168 evalue=8.8e-60 interpro_id=IPR021886 interpro_description=MgsA AAA+ ATPase C-terminal)
ACD18_128_2
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

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834..1229
DNA (396bp) protein (132aa)
hypothetical protein
DUF208 (db=HMMPfam db_id=PF02677 from=1 to=118 evalue=1.1e-38 interpro_id=IPR003828 interpro_description=Protein of unknown function DUF208)
hypothetical protein; K09765 hypothetical protein alias=ACD18_C00128G00002,ACD18_10851.6655.21G0002,ACD18_10851.6655.21_2 id=14022 tax=ACD18 species=uncultured SUP05 cluster bacterium genus=unknown taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria organism_group=OD1, not OD1-i organism_desc= OD1
hypothetical protein; K09765 hypothetical protein Tax=RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated
ACD18_128_3

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comp(1304..1729)
DNA (426bp) protein (142aa)
conserved hypothetical protein
HI0065_YjeE: ATPase, YjeE family (db=HMMTigr db_id=TIGR00150 from=8 to=139 evalue=4.2e-36 interpro_id=IPR003442 interpro_description=Uncharacterised protein family UPF0079, ATPase bacteria)
UPF0079 (db=HMMPfam db_id=PF02367 from=11 to=132 evalue=1.1e-35 interpro_id=IPR003442 interpro_description=Uncharacterised protein family UPF0079, ATPase bacteria)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=5 to=133 evalue=1.5e-31)
ACD18_128_4
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

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comp(1733..3208)
DNA (1476bp) protein (492aa)
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase
transmembrane_regions (db=TMHMM db_id=tmhmm from=179 to=201)
transmembrane_regions (db=TMHMM db_id=tmhmm from=214 to=236)
transmembrane_regions (db=TMHMM db_id=tmhmm from=275 to=294)
ACD18_128_5
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

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comp(3269..4555)
DNA (1287bp) protein (429aa)
Serine hydroxymethyltransferase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RLQ3_FIBSS (db=UNIREF evalue=3.0e-144 bit_score=515.0 identity=57.28 coverage=95.5710955710956)
glyA; glycine hydroxymethyltransferase (EC:2.1.2.1)
glyA; glycine hydroxymethyltransferase (EC:2.1.2.1)
SHMT (db=PatternScan db_id=PS00096 from=232 to=248 evalue=0.0 interpro_id=IPR019798 interpro_description=Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO=Molecular Function: glycine hydroxymethyltransferase activity (GO:0004372), Biological Process: glycine metabolic process (GO:0006544), Biological Process: L-serine metabolic process (GO:0006563), Molecular Function: pyridoxal phosphate binding (GO:0030170))
ACD18_128_6

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comp(4695..6695)
DNA (2001bp) protein (667aa)
putative secreted protein containing fibronectin type III protein
seg (db=Seg db_id=seg from=86 to=104)
seg (db=Seg db_id=seg from=27 to=48)
Purple acid phosphatase, N-terminal domain (db=superfamily db_id=SSF49363 from=35 to=143 evalue=4.6e-11 interpro_id=IPR008963 interpro_description=Purple acid phosphatase-like, N-terminal GO=Molecular Function: acid phosphatase activity (GO:0003993), Molecular Function: metal ion binding (GO:0046872))
Do not see a CxxCH domain (or any C) Jill Banfield (11/15/12)
Displaying 6 items

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