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ACDPHA_1

Alias: ACDPHA_7756.3311.21

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Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACDPHA_1_1
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..1400
DNA (1398bp) protein (466aa)
phage integrase rbh
Phage integrase n=1 Tax=Roseovarius sp. TM1035 RepID=A6DV78_9RHOB (db=UNIREF evalue=2.0e-104 bit_score=383.0 identity=49.87 coverage=82.1888412017167)
DNA breaking-rejoining enzymes (db=superfamily db_id=SSF56349 from=257 to=455 evalue=8.7e-16 interpro_id=IPR011010 interpro_description=DNA breaking-rejoining enzyme, catalytic core GO=Molecular Function: DNA binding (GO:0003677))
Phage_integrase (db=HMMPfam db_id=PF00589 from=297 to=442 evalue=1.1e-07 interpro_id=IPR002104 interpro_description=Integrase, catalytic core, phage GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310), Biological Process: DNA integration (GO:0015074))
ACDPHA_1_2
Rhodobacter capsulatus, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1505..2710
DNA (1206bp) protein (402aa)
HK97 family phage portal protein rbh
HK97 family phage portal protein rbh
Phage portal protein, HK97 family n=1 Tax=Rhodobacter capsulatus SB 1003 RepID=D5ALJ6_RHOCB (db=UNIREF evalue=3.0e-107 bit_score=392.0 identity=59.73 coverage=93.0348258706468)
seg (db=Seg db_id=seg from=33 to=44)
ACDPHA_1_3
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2703..3029
DNA (327bp) protein (109aa)
Protein of unknown function (DUF3356)
DUF3356 (db=HMMPfam db_id=PF11836 from=10 to=101 evalue=6.5e-17 interpro_id=IPR021791 interpro_description=Protein of unknown function DUF3356)
Uncharacterized protein n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) RepID=Q3J3W6_RHOS4
Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence {ECO:0000313|EMBL:ABA78518.1}; TaxID=272943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rho
ACDPHA_1_4
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3026..3355
DNA (330bp) protein (110aa)
putative phage phi-C31 gp36-like protein / Major capsid protein, HK97 family
Phage major capsid protein, HK97 family n=1 Tax=Rhodobacter capsulatus SB 1003 RepID=D5ALJ8_RHOCB (db=UNIREF evalue=1.0e-37 bit_score=158.0 identity=80.0 coverage=99.0909090909091)
seg (db=Seg db_id=seg from=80 to=91)
Peptidase_U35 (db=HMMPfam db_id=PF04586 from=16 to=108 evalue=3.0e-20 interpro_id=IPR006433 interpro_description=Peptidase U35, phage prohead HK97)
Displaying 4 items

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