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ACDNOVEL_53

Alias: ACDNOVEL_8723.9997.15

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACDNOVEL_53_1
Amphimedon queenslandica, Amphimedon, Haplosclerida, Demospongiae, Porifera, Eukaryota

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comp(673..3342)
DNA (2670bp) protein (890aa)
Reverse transcriptase like protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8S5I2_9RHOB (db=UNIREF evalue=0.0 bit_score=753.0 identity=50.36 coverage=92.5842696629213)
reverse transcriptase like protein (db=KEGG evalue=2.0e-76 bit_score=291.0 identity=36.67 coverage=49.1011235955056)
seg (db=Seg db_id=seg from=97 to=110)
seg (db=Seg db_id=seg from=51 to=64)
ACDNOVEL_53_2
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3464..4348)
DNA (885bp) protein (295aa)
ATPase-like protein (db=KEGG evalue=2.0e-38 bit_score=162.0 identity=36.69 coverage=98.3050847457627)
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase (db=superfamily db_id=SSF55874 from=113 to=252 evalue=1.2e-06 interpro_id=IPR003594 interpro_description=ATPase-like, ATP-binding domain GO=Molecular Function: ATP binding (GO:0005524))
HATPase_c (db=HMMPfam db_id=PF02518 from=152 to=254 evalue=5.5e-06 interpro_id=IPR003594 interpro_description=ATPase-like, ATP-binding domain GO=Molecular Function: ATP binding (GO:0005524))
Putative uncharacterized protein n=1 Tax=Pseudomonas aeruginosa 152504 RepID=F5KWH8_PSEAI
ACDNOVEL_53_3

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comp(4287..4925)
DNA (639bp) protein (213aa)
Putative uncharacterized protein n=1 Tax=Gram-negative bacterium 0471 RepID=Q8GJJ1_9BACT (db=UNIREF evalue=1.0e-39 bit_score=166.0 identity=45.0 coverage=84.037558685446)
hypothetical protein (db=KEGG evalue=2.0e-34 bit_score=149.0 identity=40.45 coverage=83.0985915492958)
ACDNOVEL_53_4
Rhodococcus, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(5055..5231)
DNA (177bp) protein (59aa)
seg (db=Seg db_id=seg from=38 to=56)
DUF1508 (db=HMMPfam db_id=PF07411 from=10 to=56 evalue=4.1e-16 interpro_id=IPR010879 interpro_description=Protein of unknown function DUF1508)
ACDNOVEL_53_5
Methylosinus trichosporium, Methylosinus, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5341..5622)
DNA (282bp) protein (94aa)
Putative uncharacterized protein n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QQT3_METTR (db=UNIREF evalue=7.0e-10 bit_score=66.2 identity=46.15 coverage=75.531914893617)
ACDNOVEL_53_6
Methylosinus trichosporium, Methylosinus, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5619..6014)
DNA (396bp) protein (132aa)
Putative uncharacterized protein n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QQT4_METTR (db=UNIREF evalue=4.0e-17 bit_score=90.1 identity=40.31 coverage=94.6969696969697)
seg (db=Seg db_id=seg from=76 to=87)
ACDNOVEL_53_7
Methylosinus trichosporium, Methylosinus, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6016..7356)
DNA (1341bp) protein (447aa)
UBA/THIF-type NAD/FAD binding protein n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QQT5_METTR (db=UNIREF evalue=2.0e-80 bit_score=303.0 identity=39.77 coverage=97.3154362416107)
hypothetical protein (db=KEGG evalue=5.0e-41 bit_score=172.0 identity=29.28 coverage=97.7628635346756)
Activating enzymes of the ubiquitin-like proteins (db=superfamily db_id=SSF69572 from=166 to=425 evalue=7.0e-52 interpro_id=IPR009036 interpro_description=Molybdenum cofactor biosynthesis, MoeB)
no description (db=Gene3D db_id=G3DSA:3.40.50.720 from=147 to=398 evalue=7.5e-41 interpro_id=IPR016040 interpro_description=NAD(P)-binding domain GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: binding (GO:0005488), Biological Process: metabolic process (GO:0008152))
ACDNOVEL_53_8
Methylosinus trichosporium, Methylosinus, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7353..7877)
DNA (525bp) protein (175aa)
Putative uncharacterized protein n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QQT7_METTR (db=UNIREF evalue=6.0e-25 bit_score=116.0 identity=41.34 coverage=97.1428571428571)
ACDNOVEL_53_9

Not on your lists

comp(7917..8195)
DNA (279bp) protein (93aa)
ihfA-3; integration host factor subunit subunit alpha
HISTONE_LIKE (db=PatternScan db_id=PS00045 from=46 to=65 evalue=0.0 interpro_id=IPR020816 interpro_description=Histone-like DNA-binding protein, conserved site GO=Molecular Function: DNA binding (GO:0003677))
no description (db=HMMSmart db_id=SM00411 from=1 to=90 evalue=2.0e-30 interpro_id=IPR000119 interpro_description=Histone-like bacterial DNA-binding protein GO=Molecular Function: DNA binding (GO:0003677))
Bac_DNA_binding (db=HMMPfam db_id=PF00216 from=1 to=90 evalue=7.5e-29 interpro_id=IPR000119 interpro_description=Histone-like bacterial DNA-binding protein GO=Molecular Function: DNA binding (GO:0003677))
ACDNOVEL_53_10
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8399..9049)
DNA (651bp) protein (217aa)
hypothetical protein (db=KEGG evalue=3.0e-104 bit_score=380.0 identity=86.38 coverage=97.6958525345622)
Putative uncharacterized protein n=1 Tax=Geobacter sulfurreducens RepID=Q74DE9_GEOSL (db=UNIREF evalue=4.0e-104 bit_score=380.0 identity=86.38 coverage=97.6958525345622)
Uncharacterized protein n=2 Tax=Geobacter sulfurreducens RepID=Q74DE9_GEOSL
ACDNOVEL_53_11
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9049..9918)
DNA (870bp) protein (290aa)
hypothetical protein (db=KEGG evalue=8.0e-147 bit_score=523.0 identity=87.85 coverage=98.9655172413793)
Putative uncharacterized protein n=1 Tax=Geobacter sulfurreducens RepID=Q74DE8_GEOSL (db=UNIREF evalue=9.0e-147 bit_score=523.0 identity=87.85 coverage=98.9655172413793)
DUF1814 (db=HMMPfam db_id=PF08843 from=32 to=272 evalue=2.3e-35 interpro_id=IPR014942 interpro_description=Protein of unknown function DUF1814)
Displaying 11 items

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