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ACD18

Rifle_ACD_RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated_32_1
In projects: Rifle_ACD  |  all_cpr_genomes  |  ggK_CPR

Consensus taxonomy: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated  →  Magasanikbacteria  →  Parcubacteria  →  Bacteria

Metagenomic Context

Properties

Avg. coverage: 1.00 Longest contig: 43.39 Kbp Bin length: 1.28 Mbp GC content: 31.95 %
Contigs count: 188 Features count: 1286 rRNAs count: 0 tRNAs count: 0

Genome completeness

near complete RP 50 / 55 MC: 17 BSCG 44 / 51 MC: 8 ASCG 0 / 38

Description

OD1

Displaying items 101-150 of 188 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
ACD18_129 ACD18_62117.2566.5
Species: uncultured bacterium (100%)
4 2600 bp 29.92 1.00 82.27
done Jill Banfield (11/15/12)
ACD18_130 ACD18_297594.3094.5
Class: Magasanikbacteria (66.67%)
3 3128 bp 31.46 1.00 80.66
done Jill Banfield (11/15/12)
ACD18_131 ACD18_204065.1999.6
Species: uncultured bacterium (100%)
3 2033 bp 30.15 1.00 69.21
done Jill Banfield (11/15/12)
ACD18_132 ACD18_1539.6751.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (60%)
5 6797 bp 30.66 1.00 92.11
done Jill Banfield (11/15/12)
ACD18_133 ACD18_217180.3300.5
Species: uncultured bacterium (80%)
5 3334 bp 29.12 1.00 69.56
done Jill Banfield (11/15/12)
ACD18_134 ACD18_11362.2160.5
Species: ACD18 (50%)
2 2194 bp 28.81 1.00 100.09
done Jill Banfield (11/15/12)
ACD18_135 ACD18_111108.4419.5
Species: uncultured bacterium (57.14%)
7 4453 bp 31.30 1.00 94.18
done Jill Banfield (11/15/12)
ACD18_136 ACD18_54037.2449.7
Species: uncultured bacterium (100%)
5 2483 bp 29.84 1.00 90.50
done Jill Banfield (11/15/12)
ACD18_137 ACD18_824.12024.21
Species: uncultured bacterium (75%)
8 12064 bp 34.30 1.00 88.83
done Jill Banfield (11/15/12)
ACD18_138 ACD18_89878.2590.5
Species: uncultured bacterium (66.67%)
3 2624 bp 30.41 1.00 85.06
done Jill Banfield (11/15/12)
ACD18_139 ACD18_1056.6448.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (75%)
4 6488 bp 34.03 1.00 92.15
done Jill Banfield (11/15/12)
ACD18_140 ACD18_176426.5817.6
Species: uncultured bacterium (57.14%)
7 5851 bp 27.14 1.00 96.70
done Jill Banfield (11/15/12)
ACD18_141 ACD18_378277.2358.5
Species: uncultured bacterium (100%)
4 2392 bp 30.73 1.00 60.58
done Jill Banfield (11/15/12)
ACD18_142 ACD18_45421.2433.5
Species: uncultured bacterium (100%)
3 2467 bp 30.77 1.00 94.49
done Jill Banfield (11/15/12)
ACD18_143 ACD18_8988.9158.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (100%)
4 9198 bp 32.56 1.00 92.56
done Jill Banfield (11/15/12)
ACD18_144 ACD18_193976.2688.5
Species: uncultured bacterium (66.67%)
3 2722 bp 31.63 1.00 79.46
done Jill Banfield (11/15/12)
ACD18_145 ACD18_5212.5553.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (75%)
4 5599 bp 31.81 1.00 88.41
done Jill Banfield (11/15/12)
ACD18_146 ACD18_1959.3108.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (75%)
4 3148 bp 34.91 1.00 90.91
done Jill Banfield (11/15/12)
ACD18_147 ACD18_1649.2800.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (75%)
4 2846 bp 31.69 1.00 71.47
done Jill Banfield (11/15/12)
ACD18_148 ACD18_235991.2129.4
Class: Magasanikbacteria (66.67%)
3 2163 bp 29.26 1.00 47.71
done Jill Banfield (11/15/12)
ACD18_149 ACD18_2975.4908.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (66.67%)
6 4954 bp 31.91 1.00 86.66
done Jill Banfield (11/15/12)
ACD18_150 ACD18_181033.5471.5
Species: uncultured bacterium (75%)
4 5505 bp 29.61 1.00 75.15
done Jill Banfield (11/15/12)
ACD18_151 ACD18_811.3885.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (60%)
5 3931 bp 28.62 1.00 69.22
done Jill Banfield (11/15/12)
ACD18_152 ACD18_269219.2551.5
Species: uncultured bacterium (100%)
4 2585 bp 30.91 1.00 73.11
done Jill Banfield (11/15/12)
ACD18_153 ACD18_305239.2954.6
Species: uncultured bacterium (66.67%)
3 2988 bp 32.76 1.00 99.40
done Jill Banfield (11/15/12)
ACD18_154 ACD18_149.4560.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (50%)
4 4606 bp 32.46 1.00 97.83
done Jill Banfield (11/15/12)
ACD18_155 ACD18_562.3279.24
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (75%)
4 3319 bp 31.43 1.00 82.89
done Jill Banfield (11/15/12)
ACD18_156 ACD18_79175.2781.4
Species: uncultured bacterium (50%)
2 2815 bp 33.14 1.00 75.45
done Jill Banfield (11/15/12)
ACD18_157 ACD18_117225.3584.5
Species: uncultured bacterium (100%)
3 3618 bp 30.13 1.00 67.99
done Jill Banfield (11/15/12)
ACD18_158 ACD18_39124.2976.6
Species: uncultured bacterium (100%)
3 3010 bp 27.04 1.00 93.09
done Jill Banfield (11/15/12)
ACD18_159 ACD18_10029.6640.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (77.78%)
9 6686 bp 30.93 1.00 66.77
done Jill Banfield (11/15/12)
ACD18_160 ACD18_8502.8395.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (100%)
9 8441 bp 30.45 1.00 64.19
done Jill Banfield (11/15/12)
ACD18_161 ACD18_1025.3163.22
Species: uncultured bacterium (80%)
5 3203 bp 32.63 1.00 82.70
done Jill Banfield (11/15/12)
ACD18_162 ACD18_894.2224.20
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (50%)
2 2264 bp 36.09 1.00 94.21
done Jill Banfield (11/15/12)
ACD18_163 ACD18_23163.2086.5
Species: uncultured bacterium (100%)
2 2120 bp 31.70 1.00 88.16
add Jill Banfield (11/15/12)
ACD18_164 ACD18_233382.3131.6
Species: uncultured bacterium (100%)
5 3165 bp 29.57 1.00 77.82
done Jill Banfield (11/15/12)
ACD18_165 ACD18_155829.2694.4
Species: uncultured bacterium (100%)
1 2728 bp 33.14 1.00 10.34
done Jill Banfield (11/15/12)
ACD18_166 ACD18_1803.12972.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (80%)
10 13012 bp 32.69 1.00 93.19
done Jill Banfield (11/15/12)
ACD18_167 ACD18_1180.5731.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (83.33%)
6 5771 bp 34.69 1.00 95.29
done Jill Banfield (11/15/12)
ACD18_168 ACD18_354327.4380.4
Species: RIFOXYA2_FULL_OD1_Magasanikbacteria_44_8_curated (50%)
2 4414 bp 38.17 1.00 94.81
done Jill Banfield (11/15/12)
ACD18_169 ACD18_123462.2626.4
Species: uncultured bacterium (100%)
1 2660 bp 32.03 1.00 52.78
done Jill Banfield (11/15/12)
ACD18_170 ACD18_69666.2917.5
Species: uncultured bacterium (100%)
3 2951 bp 32.29 1.00 63.23
done Jill Banfield (11/15/12)
ACD18_171 ACD18_3116.3486.21
Species: uncultured bacterium (100%)
4 3532 bp 34.23 1.00 88.76
done Jill Banfield (11/15/12)
ACD18_172 ACD18_93916.2863.6
Species: uncultured bacterium (100%)
3 2897 bp 32.17 1.00 78.08
done Jill Banfield (11/15/12)
ACD18_173 ACD18_26051.2011.20
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (50%)
2 2051 bp 32.03 1.00 44.90
done Jill Banfield (11/15/12)
ACD18_174 ACD18_10983.4596.19
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (50%)
2 4636 bp 33.69 1.00 96.23
done Jill Banfield (11/15/12)
ACD18_175 ACD18_31582.2459.5
Species: uncultured bacterium (100%)
2 2493 bp 33.61 1.00 96.87
done Jill Banfield (11/15/12)
ACD18_176 ACD18_213564.2067.5
Species: uncultured bacterium (100%)
3 2101 bp 30.65 1.00 80.96
done Jill Banfield (11/15/12)
ACD18_177 ACD18_220755.2170.4
Species: uncultured bacterium (100%)
1 2204 bp 33.94 1.00 43.83
done Jill Banfield (11/15/12)
ACD18_178 ACD18_208343.2919.5
Species: uncultured bacterium (100%)
7 2953 bp 32.07 1.00 77.62
done Jill Banfield (11/15/12)
Displaying items 101-150 of 188 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.