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13_1_40cm_2_scaffold_173334

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Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_173334_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(2..490)
DNA (489bp) protein (163aa)
DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
DNA ligase D id=4930074 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DNA ligase D
13_1_40cm_2_scaffold_173334_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(483..1892)
DNA (1410bp) protein (470aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCF9_9BACT
hypothetical protein; K07052 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_40cm_2_scaffold_173334_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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1947..2810
DNA (864bp) protein (288aa)
Probable DNA repair protein Anae109_0938 id=4930072 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Ku family containing protein; K10979 DNA end-binding protein Ku Tax=GWA2_Rokubacteria_73_35_curated
Ku family containing protein
13_1_40cm_2_scaffold_173334_4
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

comp(2794..3093)
DNA (300bp) protein (100aa)
alcohol dehydrogenase; K00344 NADPH2:quinone reductase [EC:1.6.5.5] Tax=RBG_16_NC10_65_8_curated
Alcohol dehydrogenase zinc-binding domain protein id=4141956 bin=GWA2_Methylomirabilis_73_35 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
alcohol dehydrogenase
Displaying 4 items

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