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13_1_40cm_2_scaffold_8309

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_8309_1
unknown

Not on your lists

comp(1..135)
DNA (135bp) protein (45aa)

This feature has no annotations

13_1_40cm_2_scaffold_8309_2
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(163..546)
DNA (384bp) protein (128aa)
Methyltransferase type 11 n=1 Tax=Achromobacter piechaudii HLE RepID=J4YJX2_9BURK
Methyltransferase type 11 {ECO:0000313|EMBL:EJO31348.1}; TaxID=1156919 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter pi
putative methyltransferase
13_1_40cm_2_scaffold_8309_3
GWC2_Elusimicrobia_64_44_curated, Elusimicrobia, Bacteria

Not on your lists

comp(571..1317)
DNA (747bp) protein (249aa)
Putative methyltransferase id=3354634 bin=GWA2_Elusimicrobia_66_18 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
type 11 methyltransferase Tax=GWC2_Elusimicrobia_64_44_curated
type 11 methyltransferase
13_1_40cm_2_scaffold_8309_4
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1434..1769)
DNA (336bp) protein (112aa)
PemK-like protein; K07171 mRNA interferase [EC:3.1.-.-] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PemK-like protein id=1852500 bin=GWD2_Deltaproteobacteria_55_8 species=Nitrosococcus oceani genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
MazF family transcriptional regulator
13_1_40cm_2_scaffold_8309_5
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(1754..1996)
DNA (243bp) protein (81aa)
CopG family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
CopG family transcriptional regulator id=16988688 bin=RBG_16_Aminicenantes_63_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
13_1_40cm_2_scaffold_8309_6
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2201..4147
DNA (1947bp) protein (649aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000367495D
Uncharacterized protein {ECO:0000313|EMBL:GAO35354.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp.
fecR family protein
13_1_40cm_2_scaffold_8309_7
unknown

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4428..4616
DNA (189bp) protein (63aa)

This feature has no annotations

13_1_40cm_2_scaffold_8309_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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4613..5275
DNA (663bp) protein (221aa)
Lytic transglycosylase, catalytic id=4686850 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Lytic transglycosylase, catalytic Tax=GWA2_Rokubacteria_70_23_curated
lytic transglycosylase, catalytic
13_1_40cm_2_scaffold_8309_9
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5540..6235)
DNA (696bp) protein (232aa)
Tax=RBG_13_Deltaproteobacteria_61_14_curated
13_1_40cm_2_scaffold_8309_10
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

6515..7432
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003649073
NemA; NADH:flavin oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
NADH:flavin oxidoreductase
13_1_40cm_2_scaffold_8309_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7551..7976)
DNA (426bp) protein (142aa)
Fimbrial protein pilin Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative Fimbrial protein pilin id=4953732 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Fimbrial protein pilin
13_1_40cm_2_scaffold_8309_12
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

8406..9110
DNA (705bp) protein (235aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14627205 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_2_scaffold_8309_13
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

9129..10745
DNA (1617bp) protein (539aa)
histidine kinase (EC:2.7.13.3) id=14627202 bin=bin7_NC10_sister species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
histidine kinase (EC:2.7.13.3) Tax=CSP1_6_Rokubacteria
histidine kinase (EC:2.7.13.3)
13_1_40cm_2_scaffold_8309_14
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

10742..11116
DNA (375bp) protein (125aa)
response regulator in two-component regulatory system (CheY-like protein) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
response regulator in two-component regulatory system (CheY-like protein) id=14627203 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
response regulator in two-component regulatory system (CheY-like protein)
13_1_40cm_2_scaffold_8309_15
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

11134..11571
DNA (438bp) protein (146aa)
desulfoferrodoxin ferrous iron-binding region; K05919 superoxide reductase [EC:1.15.1.2] id=14627204 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
sor; rubredoxin superoxide reductase (1-Fe-SOR) (EC:1.15.1.2); K05919 superoxide reductase [EC:1.15.1.2] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
sor; rubredoxin superoxide reductase (1-Fe-SOR) (EC:1.15.1.2)
13_1_40cm_2_scaffold_8309_16
CSP1_5_NC10, NC10, Bacteria

Not on your lists

11580..12710
DNA (1131bp) protein (377aa)
adenylate/guanylate cyclase Tax=CSP1_5_NC10
adenylate/guanylate cyclase id=14429036 bin=bin3_NC10 species=Methyloferula stellata genus=Methyloferula taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
adenylate/guanylate cyclase
13_1_40cm_2_scaffold_8309_17
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12668..14155)
DNA (1488bp) protein (496aa)
amidohydrolase n=1 Tax=Scytonema hofmanni RepID=UPI0003465913
hypothetical protein Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
hypothetical protein
13_1_40cm_2_scaffold_8309_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

14285..15277
DNA (993bp) protein (331aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Oxidoreductase family protein id=4827670 bin=GWA2_Methylomirabilis_73_35 species=Roseomonas cervicalis genus=Roseomonas taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_2_scaffold_8309_19
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15310..15966)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Bacteroides dorei CL03T12C01 RepID=I8WBY9_9BACE
hypothetical protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
hypothetical protein
13_1_40cm_2_scaffold_8309_20
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

16157..17170
DNA (1014bp) protein (338aa)
Xaa-Pro dipeptidyl-peptidase, peptidase family S15 (EC:3.4.14.11)
dipeptidyl aminopeptidase; K06978 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Hydrolase CocE/NonD family protein id=3360200 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Rhodococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Displaying 20 items

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