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13_1_40cm_4_scaffold_12404

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Displaying 12 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_12404_1
unknown

Not on your lists

3..98
DNA (96bp) protein (32aa)

This feature has no annotations

13_1_40cm_4_scaffold_12404_2
unknown

Not on your lists

comp(174..335)
DNA (162bp) protein (54aa)

This feature has no annotations

13_1_40cm_4_scaffold_12404_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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478..711
DNA (234bp) protein (78aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=4775212 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_12404_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

761..1270
DNA (510bp) protein (170aa)
hypothetical protein id=4775186 bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum hydrothermale genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_4_scaffold_12404_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1591..2088
DNA (498bp) protein (166aa)
peptidase M48, Ste24p Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Peptidase M48, Ste24p id=4599610 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
peptidase M48, Ste24p
13_1_40cm_4_scaffold_12404_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2280..2723
DNA (444bp) protein (148aa)
cell division protein MraZ; K03925 MraZ protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Protein MraZ id=3504172 bin=GWA2_Methylomirabilis_73_35 species=Desulfomicrobium baculatum genus=Desulfomicrobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cell division protein MraZ
13_1_40cm_4_scaffold_12404_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2735..3595
DNA (861bp) protein (287aa)
mraW; S-adenosyl-methyltransferase MraW; K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Ribosomal RNA small subunit methyltransferase H id=3504171 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
mraW; S-adenosyl-methyltransferase MraW
13_1_40cm_4_scaffold_12404_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

3592..3963
DNA (372bp) protein (124aa)
hypothetical protein id=3504170 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_4_scaffold_12404_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

3960..5933
DNA (1974bp) protein (658aa)
ftsI; peptidoglycan transglycosylase and transpeptidase FtsI; K03587 cell division protein FtsI (penicillin-binding protein 3) [EC:2.4.1.129] Tax=GWA2_Rokubacteria_73_35_curated
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Peptidoglycan synthetase FtsI id=3884431 bin=GWF2_Methylomirabilis_70_14 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_12404_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5947..7428
DNA (1482bp) protein (494aa)
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13); K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] Tax=RIFCSPLOWO2_02_FULL_Rok
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13)
UDP-N-acetylmuramyl-tripeptide synthetase id=3503986 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_12404_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

7437..8822
DNA (1386bp) protein (462aa)
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase; K01929 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] Tax=GWA2_Rokubacteria_73_35_curated
murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase MurF (EC:6.3.2.10)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase id=3503981 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_12404_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8832..9911
DNA (1080bp) protein (360aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13); K01000 phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase id=3503978 bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Displaying 12 items

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