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13_1_40cm_4_scaffold_17887

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_17887_1
unknown

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2..250
DNA (249bp) protein (83aa)

This feature has no annotations

13_1_40cm_4_scaffold_17887_2
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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comp(240..953)
DNA (714bp) protein (238aa)
serA; D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
serA; D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95) id=14625486 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
serA; D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95)
13_1_40cm_4_scaffold_17887_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1758..2900)
DNA (1143bp) protein (381aa)
sga; Serine-glyoxylate aminotransferase (EC:2.6.1.45) Tax=GWA2_Rokubacteria_73_35_curated
sga; Serine-glyoxylate aminotransferase (EC:2.6.1.45)
Serine-glyoxylate aminotransferase id=3779775 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_17887_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2897..4483)
DNA (1587bp) protein (529aa)
SagB-type dehydrogenase domain protein id=3779776 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Haloterrigena taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
SagB-type dehydrogenase domain-containing protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_4_scaffold_17887_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4527..5567)
DNA (1041bp) protein (347aa)
methylthioribose-1-phosphate isomerase (EC:5.3.1.23); K08963 methylthioribose-1-phosphate isomerase [EC:5.3.1.23] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
methylthioribose-1-phosphate isomerase (EC:5.3.1.23)
Methylthioribose-1-phosphate isomerase id=3779777 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_17887_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5564..5851)
DNA (288bp) protein (96aa)
hypothetical protein; K09131 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=4599709 bin=GWC2_Methylomirabilis_70_16 species=Isosphaera pallida genus=Isosphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_17887_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5823..6296)
DNA (474bp) protein (158aa)
hypothetical protein; K04074 cell division initiation protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
cell-division initiation protein; K04074 cell division initiation protein id=14625493 bin=bin7_NC10_sister species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
cell division protein DivIVA
13_1_40cm_4_scaffold_17887_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6313..6618)
DNA (306bp) protein (102aa)
hypothetical protein; K02221 YggT family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=1871976 bin=GWB2_Proteobacteria_55_19 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
hypothetical protein
13_1_40cm_4_scaffold_17887_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6623..7444)
DNA (822bp) protein (274aa)
proC; pyrroline-5-carboxylate reductase (EC:1.5.1.2); K00286 pyrroline-5-carboxylate reductase [EC:1.5.1.2] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
proC; pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase id=4599706 bin=GWC2_Methylomirabilis_70_16 species=Flexistipes sinusarabici genus=Flexistipes taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_4_scaffold_17887_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7441..8136)
DNA (696bp) protein (232aa)
hypothetical protein; K06997 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein; K06997 id=14625496 bin=bin7_NC10_sister species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
alanine racemase domain-containing protein
13_1_40cm_4_scaffold_17887_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(9018..10175)
DNA (1158bp) protein (386aa)
Cell division protein FtsZ id=4191402 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ftsZ; cell division protein ftsZ Tax=GWA2_Rokubacteria_73_35_curated
ftsZ; cell division protein ftsZ
13_1_40cm_4_scaffold_17887_12
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(10279..11523)
DNA (1245bp) protein (415aa)
cell division protein FtsA; K03590 cell division protein FtsA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Cell division protein ftsA id=4191403 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ftsA; cell division protein FtsA
13_1_40cm_4_scaffold_17887_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(11523..12368)
DNA (846bp) protein (282aa)
polypeptide-transport-associated domain-containing protein; K03589 cell division protein FtsQ Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Polypeptide-transport-associated domain protein FtsQ-type id=4191404 bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
polypeptide-transport-associated domain-containing protein
13_1_40cm_4_scaffold_17887_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(12368..13231)
DNA (864bp) protein (288aa)
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158); K00075 UDP-N-acetylmuramate dehydrogenase [EC:1.1.1.158] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase id=4191405 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Displaying 14 items

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