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13_1_40cm_4_scaffold_19192

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_19192_1
unknown

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comp(302..481)
DNA (180bp) protein (60aa)

This feature has no annotations

13_1_40cm_4_scaffold_19192_2
unknown

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comp(562..774)
DNA (213bp) protein (71aa)

This feature has no annotations

13_1_40cm_4_scaffold_19192_3
unknown

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905..1549
DNA (645bp) protein (215aa)

This feature has no annotations

13_1_40cm_4_scaffold_19192_4

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comp(1494..2141)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2QER5_METFO
Uncharacterized protein {ECO:0000313|EMBL:KKN11127.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_40cm_4_scaffold_19192_trna_1
unknown

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comp(2256..2337)
DNA (82bp)
transferRNA
13_1_40cm_4_scaffold_19192_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2362..3177)
DNA (816bp) protein (272aa)
peptide ABC transporter permease; K02034 peptide/nickel transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Peptide ABC transporter, membrane protein id=4787929 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptide ABC transporter membrane protein
13_1_40cm_4_scaffold_19192_6
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(3219..3749)
DNA (531bp) protein (177aa)
ABC transporter permease; K02033 peptide/nickel transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Binding-protein-dependent transport systems inner membrane component id=4787931 bin=GWA2_Methylomirabilis_73_35 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
binding-protein-dependent transport system inner membrane protein
13_1_40cm_4_scaffold_19192_7
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(4220..5869)
DNA (1650bp) protein (550aa)
ABC transporter substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Oligopeptide-binding protein id=3340669 bin=GWC2_Methylomirabilis_70_24 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
oligopeptide-binding protein
13_1_40cm_4_scaffold_19192_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(5871..6212)
DNA (342bp) protein (114aa)
secG; preprotein translocase subunit SecG; K03075 preprotein translocase subunit SecG Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Preprotein translocase, SecG subunit id=4787935 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
preprotein translocase subunit SecG
13_1_40cm_4_scaffold_19192_9
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(6217..6996)
DNA (780bp) protein (260aa)
tpiA; triosephosphate isomerase (EC:5.3.1.1); K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase id=4787937 bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_19192_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6993..8135)
DNA (1143bp) protein (381aa)
phosphoglycerate kinase (EC:2.7.2.3); K00927 phosphoglycerate kinase [EC:2.7.2.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase id=4828185 bin=GWC2_Methylomirabilis_70_16 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_4_scaffold_19192_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(8137..9141)
DNA (1005bp) protein (335aa)
cbbG; glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12) Tax=GWA2_Rokubacteria_73_35_curated
cbbG; glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) id=4787941 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_19192_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(9207..9656)
DNA (450bp) protein (150aa)
Amidophosphoribosyltransferase, putative id=4787943 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amidophosphoribosyltransferase Tax=GWA2_Rokubacteria_73_35_curated
comF; competence protein F
Displaying 13 items

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