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13_1_40cm_4_scaffold_2995

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Displaying 15 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2995_1
unknown

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1..78
DNA (78bp) protein (26aa)

This feature has no annotations

13_1_40cm_4_scaffold_2995_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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139..411
DNA (273bp) protein (91aa)
peroxiredoxin Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Thiol-specific antioxidant protein id=4327972 bin=GWA2_Methylomirabilis_73_35 species=Cytophaga hutchinsonii genus=Cytophaga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
thiol-specific antioxidant protein
13_1_40cm_4_scaffold_2995_3
Acetohalobium arabaticum, Acetohalobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

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comp(398..1345)
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Brevibacillus sp. phR RepID=UPI00031C1C16
nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component {ECO:0000313|EMBL:ADL12832.1}; Flags: Precursor;; TaxID=574087 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales
13_1_40cm_4_scaffold_2995_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(1370..1576)
DNA (207bp) protein (69aa)
histidine kinase; K02482 two-component system, NtrC family, sensor kinase [EC:2.7.13.3] Tax=GWC2_Rokubacteria_70_16_curated
Histidine kinase id=4849342 bin=GWC2_Methylomirabilis_70_16 species=Aromatoleum aromaticum genus=Aromatoleum taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
sensory box histidine kinase/response regulator
13_1_40cm_4_scaffold_2995_5
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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1827..3191
DNA (1365bp) protein (455aa)
Uncharacterized protein {ECO:0000313|EMBL:KIN89120.1}; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20.;"
13_1_40cm_4_scaffold_2995_6
unknown

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comp(3188..3364)
DNA (177bp) protein (59aa)

This feature has no annotations

13_1_40cm_4_scaffold_2995_7
unknown

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5646..5840
DNA (195bp) protein (65aa)

This feature has no annotations

13_1_40cm_4_scaffold_2995_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(5862..6788)
DNA (927bp) protein (309aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31); K00020 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
3-hydroxyisobutyrate dehydrogenase id=3352297 bin=GWA2_Methylomirabilis_73_35 species=Roseomonas cervicalis genus=Roseomonas taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_2995_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(6785..7117)
DNA (333bp) protein (111aa)
carboxymuconolactone decarboxylase (EC:1.11.1.15) Tax=GWA2_Rokubacteria_73_35_curated
4-carboxymuconolactone decarboxylase (EC:4.1.1.44)
Carboxymuconolactone decarboxylase id=3352295 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_2995_10
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(7140..7943)
DNA (804bp) protein (268aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-ACP reductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
3-oxoacyl-(Acyl-carrier-protein) reductase id=2521453 bin=GWC2_Methylomirabilis_70_16 species=Pseudonocardia dioxanivorans genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_4_scaffold_2995_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

8033..8788
DNA (756bp) protein (252aa)
beta-lactamase class B Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
beta-lactamase class B id=14627174 bin=bin7_NC10_sister species=Amycolatopsis balhimycina genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
putative Zn-dependent hydrolase
13_1_40cm_4_scaffold_2995_12
R_Acidobacteria_68_18, Acidobacteria, Bacteria

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8914..9870
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035D0251
cyclase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
cyclase
13_1_40cm_4_scaffold_2995_13
Acetonema longum, Acetonema, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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9870..10646
DNA (777bp) protein (259aa)
Extracellular solute-binding protein family 1 n=1 Tax=Acetonema longum DSM 6540 RepID=F7NFD9_9FIRM
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:EGO65264.1}; TaxID=1009370 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Acetonema.;" source="Acetonem
molybdate ABC transporter periplasmic protein
13_1_40cm_4_scaffold_2995_14
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10744..12384)
DNA (1641bp) protein (547aa)
Amidase n=1 Tax=Geobacillus kaustophilus GBlys RepID=U2X652_GEOKU
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase {ECO:0000313|EMBL:AHY46237.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; R
13_1_40cm_4_scaffold_2995_15
Moorea producens, Moorea, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(12381..12875)
DNA (495bp) protein (165aa)
Putative uncharacterized protein n=1 Tax=Moorea producens 3L RepID=F4XQB4_9CYAN
Putative uncharacterized protein {ECO:0000313|EMBL:EGJ33216.1}; TaxID=489825 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Moorea.;" source="Moorea producens 3L.;"
hypothetical protein
Displaying 15 items

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