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13_1_40cm_4_scaffold_6396

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_6396_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(2..733)
DNA (732bp) protein (244aa)
seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11] Tax=GWA2_Rokubacteria_73_35_curated
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase id=2336351 bin=GWA2_Methylomirabilis_73_35 species=Synergistes sp. 3_1_syn1 genus=Synergistes taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_6396_2
RLO_RIF05_58_11, RIF5, Bacteria

Not on your lists

1450..2109
DNA (660bp) protein (220aa)
ORF617 protein n=1 Tax=Mycobacterium smegmatis RepID=Q50407_MYCSM
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
hypothetical protein
13_1_40cm_4_scaffold_6396_3
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists

2198..2476
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5SFU8_9CLOT
Uncharacterized protein Tax=RBG_16_Acidobacteria_64_8_curated
13_1_40cm_4_scaffold_6396_4
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(3154..5532)
DNA (2379bp) protein (793aa)
DNA gyrase B subunit (EC:5.99.1.3); K02470 DNA gyrase subunit B [EC:5.99.1.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
gyrB; DNA gyrase subunit B; K02470 DNA gyrase subunit B [EC:5.99.1.3] id=14625299 bin=bin7_NC10_sister species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
DNA gyrase B subunit (EC:5.99.1.3)
13_1_40cm_4_scaffold_6396_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(5529..6602)
DNA (1074bp) protein (358aa)
DNA replication and repair protein RecF; K03629 DNA replication and repair protein RecF Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
DNA replication and repair protein RecF id=3212580 bin=GWC2_Methylomirabilis_70_16 species=Thermobacillus composti genus=Thermobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
DNA replication and repair protein RecF
13_1_40cm_4_scaffold_6396_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6640..7734)
DNA (1095bp) protein (365aa)
dnaN; DNA polymerase III subunit beta (EC:2.7.7.7) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
dnaN; DNA polymerase III subunit beta; K02338 DNA polymerase III subunit beta [EC:2.7.7.7] id=14625298 bin=bin7_NC10_sister species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
DNA polymerase III subunit beta
13_1_40cm_4_scaffold_6396_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7898..9217)
DNA (1320bp) protein (440aa)
dnaA; chromosomal replication initiator protein dnaA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
dnaA; chromosomal replication initiator protein dnaA id=14625297 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
dnaA; chromosomal replication initiator protein dnaA
13_1_40cm_4_scaffold_6396_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9692..9946
DNA (255bp) protein (85aa)
putative ribonuclease P protein component; K03536 ribonuclease P protein component [EC:3.1.26.5]
Ribonuclease P protein component Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Ribonuclease P protein component id=2324954 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Micromonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_6396_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9943..10170
DNA (228bp) protein (76aa)
Putative membrane protein insertion efficiency factor id=2324955 bin=GWA2_Methylomirabilis_73_35 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein; K08998 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_40cm_4_scaffold_6396_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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10173..11861
DNA (1689bp) protein (563aa)
Membrane protein insertase YidC id=2324956 bin=GWA2_Methylomirabilis_73_35 species=Desulfovibrio magneticus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
oxaA; inner membrane protein OxaA; K03217 preprotein translocase subunit YidC Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_4_scaffold_6396_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

11895..12515
DNA (621bp) protein (207aa)
glucose inhibited division protein; K03501 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] Tax=GWA2_Rokubacteria_73_35_curated
Ribosomal RNA small subunit methyltransferase G id=2324957 bin=GWA2_Methylomirabilis_73_35 species=Desulfovibrio aespoeensis genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glucose inhibited division protein
13_1_40cm_4_scaffold_6396_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12563..13369
DNA (807bp) protein (269aa)
Chromosome partitioning ATPase Soj id=2324958 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
soj1; sporulation initiation inhibitor protein Soj Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_40cm_4_scaffold_6396_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

13362..14216
DNA (855bp) protein (285aa)
Chromosome segregation DNA-binding protein id=2324959 bin=GWA2_Methylomirabilis_73_35 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
chromosome segregation DNA-binding protein; K03497 chromosome partitioning protein, ParB family Tax=GWA2_Rokubacteria_73_35_curated
ParB-like nuclease domain-containing protein
13_1_40cm_4_scaffold_6396_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

14243..15325
DNA (1083bp) protein (361aa)
tRNA-specific 2-thiouridylase mnmA; K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-] Tax=GWA2_Rokubacteria_73_35_curated
tRNA-specific 2-thiouridylase MnmA id=2324960 bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
tRNA-specific 2-thiouridylase mnmA
Displaying 14 items

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