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13_1_40cm_4_scaffold_7722

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_7722_1
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..396)
DNA (396bp) protein (132aa)
ABC transporter related n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QC92_CATAD
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACU74540.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DS
13_1_40cm_4_scaffold_7722_2
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(383..1117)
DNA (735bp) protein (245aa)
ABC transporter related protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C903_SPHTD
Branched-chain amino acid ABC transporter {ECO:0000313|EMBL:KCB41699.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bor
ABC transporter
13_1_40cm_4_scaffold_7722_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(1120..2169)
DNA (1050bp) protein (350aa)
Inner-membrane translocator id=4771378 bin=GWC2_Methylomirabilis_70_24 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
inner-membrane translocator
13_1_40cm_4_scaffold_7722_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(2156..3028)
DNA (873bp) protein (291aa)
braD; branched chain amino acid ABC transporter; K01997 branched-chain amino acid transport system permease protein id=14625559 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
braD; branched chain amino acid ABC transporter; K01997 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
inner-membrane translocator
13_1_40cm_4_scaffold_7722_5
R_NC10_66_22, NC10, Bacteria

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comp(3038..4360)
DNA (1323bp) protein (441aa)
braC; Leu/Ile/Val-binding protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Probable Leu/Ile/Val-binding protein id=3775401 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Pelagibacter ubique genus=Candidatus Pelagibacter taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
braC; Leu/Ile/Val-binding protein
13_1_40cm_4_scaffold_7722_6
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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4449..5603
DNA (1155bp) protein (385aa)
Alanine racemase {ECO:0000313|EMBL:AKF03326.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus a
Alanine racemase id=4667228 bin=GWF2_Melioribacter_38_21 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
alanine racemase
13_1_40cm_4_scaffold_7722_7
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5640..6059)
DNA (420bp) protein (140aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
Putative uncharacterized protein id=3847106 bin=GWC2_Methylomirabilis_70_16 species=Leptonema illini genus=Leptonema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_7722_8
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6056..6322)
DNA (267bp) protein (89aa)
id=3847105 Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
id=3847105 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
prevent-host-death family protein
13_1_40cm_4_scaffold_7722_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(6375..7196)
DNA (822bp) protein (274aa)
Binding-protein-dependent transport system inner membrane component id=4015915 bin=GWF2_Methylomirabilis_70_14 species=Micromonospora sp. ATCC 39149 genus=Micromonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
sugar ABC transporter permease Tax=GWC2_Rokubacteria_70_16_curated
putative sugar ABC transporter, permease protein
13_1_40cm_4_scaffold_7722_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(7197..8090)
DNA (894bp) protein (298aa)
Binding-protein-dependent transport system inner membrane component id=4138947 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
binding-protein-dependent transport systems inner membrane component; K02025 multiple sugar transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
binding-protein-dependent transport systems inner membrane component
13_1_40cm_4_scaffold_7722_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(8113..9414)
DNA (1302bp) protein (434aa)
Extracellular solute-binding protein family 1 id=4172264 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
family 1 extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
13_1_40cm_4_scaffold_7722_12
RLO_PLX_64_10, Bacteria

Not on your lists

comp(9439..10332)
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI000378658A
phytanoyl-CoA dioxygenase Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
phytanoyl-CoA dioxygenase family protein
13_1_40cm_4_scaffold_7722_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

10469..11647
DNA (1179bp) protein (393aa)
dehydrogenase, E1 component; K11381 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] Tax=GWA2_Rokubacteria_73_35_curated
Dehydrogenase E1 component id=3013129 bin=GWA2_Methylomirabilis_73_35 species=Mesorhizobium metallidurans genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dehydrogenase, E1 component
Displaying 13 items

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