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13_1_40cm_4_scaffold_7852

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_7852_1
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..848)
DNA (846bp) protein (282aa)
Phosphonate ABC transporter, periplasmic phosphonate-binding protein n=1 Tax=Thiocapsa marina 5811 RepID=F9UBD2_9GAMM
Phosphonate ABC transporter, periplasmic phosphonate-binding protein {ECO:0000313|EMBL:EGV18250.1}; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Th
ABC-type phosphate/phosphonate transport system
13_1_40cm_4_scaffold_7852_2
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(917..1384)
DNA (468bp) protein (156aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YDA9_9RHIZ
Bradyrhizobium elkanii strain UASWS1015 Contig186, whole genome shotgun sequence {ECO:0000313|EMBL:KIU44139.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
hypothetical protein
13_1_40cm_4_scaffold_7852_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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1831..2052
DNA (222bp) protein (74aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
13_1_40cm_4_scaffold_7852_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2158..2430
DNA (273bp) protein (91aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_40cm_4_scaffold_7852_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2514..3230)
DNA (717bp) protein (239aa)
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) id=1906303 bin=GWA2_Methylomirabilis_73_35 species=Patulibacter medicamentivorans genus=Patulibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter
13_1_40cm_4_scaffold_7852_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(3255..3965)
DNA (711bp) protein (237aa)
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ABC transport system protein id=4288073 bin=GWF2_Methylomirabilis_70_14 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
abc05a2; branched chain amino acid ABC transporter ATP-binding protein
13_1_40cm_4_scaffold_7852_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3970..4896)
DNA (927bp) protein (309aa)
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC-type transport system permease protein II (Probable substrates branched-chain/neutral amino acids) 2 id=4288070 bin=GWF2_Methylomirabilis_70_14 species=Marinobacter sp. ELB17 genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter
13_1_40cm_4_scaffold_7852_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4893..5747)
DNA (855bp) protein (285aa)
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Branched-chain amino acid ABC transporter permease protein I id=1906297 bin=GWA2_Methylomirabilis_73_35 species=Haloarcula vallismortis genus=Haloarcula taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
livH5; branched-chain amino acid ABC transporter permease I
13_1_40cm_4_scaffold_7852_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5768..6955)
DNA (1188bp) protein (396aa)
extracellular ligand-binding receptor Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC-type branched-chain amino acid transport system, periplasmic component id=4288064 bin=GWF2_Methylomirabilis_70_14 species=Idiomarina sp. A28L genus=Idiomarina taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
extracellular ligand-binding receptor
13_1_40cm_4_scaffold_7852_10
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

7048..8235
DNA (1188bp) protein (396aa)
Formyl-CoA transferase (EC:2.8.3.16)
L-carnitine dehydratase/bile acid-inducible protein F id=14625352 bin=bin7_NC10_sister species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
L-carnitine dehydratase/bile acid-inducible protein F Tax=CSP1_6_Rokubacteria
13_1_40cm_4_scaffold_7852_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8369..8866)
DNA (498bp) protein (166aa)
id=3674960 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative O-methyltransferase id=2479228 bin=GWC2_Methylomirabilis_70_24 species=uncultured marine microorganism HF4000_ANIW141A21 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Displaying 11 items

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