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13_1_40cm_4_scaffold_9699

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_9699_1
unknown

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comp(3..71)
DNA (69bp) protein (23aa)

This feature has no annotations

13_1_40cm_4_scaffold_9699_2
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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231..1532
DNA (1302bp) protein (434aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00037BBE30
Transposase {ECO:0000313|EMBL:CDX42730.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
transposase
13_1_40cm_4_scaffold_9699_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(1629..2321)
DNA (693bp) protein (231aa)
protease Do (EC:3.4.21.108) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
protease Do (EC:3.4.21.108) id=14625822 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
degQ; periplasmic trypsin-like serine protease lipoprotein DegQ
13_1_40cm_4_scaffold_9699_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2318..2956)
DNA (639bp) protein (213aa)
lon3; ATP-dependent protease La; K07157 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
lon3; ATP-dependent protease La; K07157 id=14625820 bin=bin7_NC10_sister species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
lon3; ATP-dependent protease La
13_1_40cm_4_scaffold_9699_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2961..4067)
DNA (1107bp) protein (369aa)
hypothetical protein; K03593 ATP-binding protein involved in chromosome partitioning Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Mrp id=4759406 bin=GWC2_Methylomirabilis_70_16 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_9699_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

4154..4639
DNA (486bp) protein (162aa)
putative oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
flavin reductase domain-containing protein id=14625818 bin=bin7_NC10_sister species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
putative oxidoreductase
13_1_40cm_4_scaffold_9699_7
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

4636..5718
DNA (1083bp) protein (361aa)
lpsC; perosamine synthetase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
DegT/DnrJ/EryC1/StrS aminotransferase id=4600877 bin=GWA2_Methylomirabilis_73_35 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
pyridoxal phosphate-dependent protein
13_1_40cm_4_scaffold_9699_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

5718..6836
DNA (1119bp) protein (373aa)
group 1 glycosyl transferase id=14625816 bin=bin7_NC10_sister species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
group 1 glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
group 1 glycosyl transferase
13_1_40cm_4_scaffold_9699_9
unknown

Not on your lists

comp(6800..7138)
DNA (339bp) protein (113aa)

This feature has no annotations

13_1_40cm_4_scaffold_9699_10
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7157..8506)
DNA (1350bp) protein (450aa)
Uncharacterized protein n=1 Tax=Burkholderia cenocepacia KC-01 RepID=V4ZND4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:ESS36533.1}; TaxID=1396830 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia comple
uncharacterized LOC100501321
13_1_40cm_4_scaffold_9699_11
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8670..9899)
DNA (1230bp) protein (410aa)
Polyketide synthase n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1FUC5_9PSEU
Polyketide synthase {ECO:0000313|EMBL:EOD62968.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 445
pks4-2; type-I PKS
13_1_40cm_4_scaffold_9699_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(9917..10792)
DNA (876bp) protein (292aa)
lipid A biosynthesis acyltransferase; K02517 lipid A biosynthesis lauroyl acyltransferase [EC:2.3.1.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Lipid A biosynthesis acyltransferase id=4785123 bin=GWC2_Methylomirabilis_70_24 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
putative acyltransferase
13_1_40cm_4_scaffold_9699_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(10939..11013)
DNA (75bp) protein (25aa)
NAD+ synthetase (EC:6.3.5.1); K01950 NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Displaying 13 items

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