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13_1_20cm_4_scaffold_1130

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Displaying 26 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_1130_1
unknown

Not on your lists

2..901
DNA (900bp) protein (300aa)

This feature has no annotations

13_1_20cm_4_scaffold_1130_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

1296..1607
DNA (312bp) protein (104aa)
Gas vesicle structural protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=GVPA_KORVE
gas vesicle protein GVPa Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
gas vesicle protein GvpA
13_1_20cm_4_scaffold_1130_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1696..2466
DNA (771bp) protein (257aa)
surE; stationary phase survival protein SurE; K03787 5'-nucleotidase [EC:3.1.3.5] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
5'-nucleotidase SurE id=4853975 bin=GWA2_Methylomirabilis_73_35 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
surE; 5'(3')-nucleotidase/polyphosphatase
13_1_20cm_4_scaffold_1130_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2475..2909
DNA (435bp) protein (145aa)
protein-L-isoaspartate O-methyltransferase; K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] id=14626516 bin=bin7_NC10_sister species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77)
13_1_20cm_4_scaffold_1130_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2870..3004
DNA (135bp) protein (45aa)
protein-L-isoaspartate O-methyltransferase; K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Protein-L-isoaspartate O-methyltransferase 1 id=4853976 bin=GWA2_Methylomirabilis_73_35 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_1130_trna_1
unknown

Not on your lists

3029..3108
DNA (80bp)
transferRNA
13_1_20cm_4_scaffold_1130_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

3159..3413
DNA (255bp) protein (85aa)
acylphosphatase; K01512 acylphosphatase [EC:3.6.1.7] Tax=GWA2_Rokubacteria_73_35_curated
Acylphosphatase id=4853977 bin=GWA2_Methylomirabilis_73_35 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
acylphosphatase
13_1_20cm_4_scaffold_1130_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3410..4246
DNA (837bp) protein (279aa)
peptidase M23B Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Peptidase M23 id=4849886 bin=GWC2_Methylomirabilis_70_16 species=Synechococcus sp. genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
peptidase M23B
13_1_20cm_4_scaffold_1130_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4236..5153
DNA (918bp) protein (306aa)
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
RNA polymerase sigma factor id=4853978 bin=GWA2_Methylomirabilis_73_35 species=Selenomonas noxia genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RNA polymerase sigma factor RpoS
13_1_20cm_4_scaffold_1130_9
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5208..6278
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08Z68_STIAD
Uncharacterized protein {ECO:0000313|EMBL:EAU65788.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Sti
hypothetical protein
13_1_20cm_4_scaffold_1130_10
unknown

Not on your lists

comp(6275..6688)
DNA (414bp) protein (138aa)

This feature has no annotations

13_1_20cm_4_scaffold_1130_11
CG_CP01_01, CG_CP01, Bacteria

Not on your lists

6945..8525
DNA (1581bp) protein (527aa)
hypothetical protein n=1 Tax=Thermodesulfatator atlanticus RepID=UPI0003B77224
hypothetical protein Tax=CG_CP01_01
hypothetical protein
13_1_20cm_4_scaffold_1130_12
unknown

Not on your lists

comp(8568..9014)
DNA (447bp) protein (149aa)

This feature has no annotations

13_1_20cm_4_scaffold_1130_13
unknown

Not on your lists

comp(9454..9888)
DNA (435bp) protein (145aa)

This feature has no annotations

13_1_20cm_4_scaffold_1130_14
Nostoc punctiforme, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(10461..11408)
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2J5N7_NOSP7
Uncharacterized protein {ECO:0000313|EMBL:ACC83769.1}; TaxID=63737 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc punctiforme (strain ATCC 29133 / PCC 73102).;"
hypothetical protein
13_1_20cm_4_scaffold_1130_15
unknown

Not on your lists

comp(11405..11638)
DNA (234bp) protein (78aa)

This feature has no annotations

13_1_20cm_4_scaffold_1130_16
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12163..12609
DNA (447bp) protein (149aa)
Anti-ECFsigma factor, ChrR n=1 Tax=Calothrix sp. PCC 7507 RepID=K9PS56_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:ETX04216.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
anti-ECFsigma factor ChrR
13_1_20cm_4_scaffold_1130_17
Microcoleus vaginatus, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

13540..13956
DNA (417bp) protein (139aa)
Integral membrane sensor hybrid histidine kinase n=1 Tax=Microcoleus vaginatus FGP-2 RepID=F5UQ48_9CYAN
Integral membrane sensor hybrid histidine kinase {ECO:0000313|EMBL:EGK83486.1}; TaxID=756067 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleu
GAF sensor hybrid histidine kinase
13_1_20cm_4_scaffold_1130_18
unknown

Not on your lists

comp(14046..14201)
DNA (156bp) protein (52aa)

This feature has no annotations

13_1_20cm_4_scaffold_1130_19
Microcoleus vaginatus, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

14341..14745
DNA (405bp) protein (135aa)
Protein-glutamate methylesterase {ECO:0000256|SAAS:SAAS00158471}; EC=3.1.1.61 {ECO:0000256|SAAS:SAAS00158471};; TaxID=756067 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; M
hypothetical protein n=1 Tax=Fischerella muscicola RepID=UPI0002E95384
multi-sensor hybrid histidine kinase
13_1_20cm_4_scaffold_1130_20
unknown

Not on your lists

comp(14568..14969)
DNA (402bp) protein (134aa)

This feature has no annotations

13_1_20cm_4_scaffold_1130_21
unknown

Not on your lists

15668..16264
DNA (597bp) protein (199aa)

This feature has no annotations

13_1_20cm_4_scaffold_1130_22
unknown

Not on your lists

16261..16539
DNA (279bp) protein (93aa)

This feature has no annotations

13_1_20cm_4_scaffold_1130_23
unknown

Not on your lists

16841..17230
DNA (390bp) protein (130aa)

This feature has no annotations

13_1_20cm_4_scaffold_1130_24

Not on your lists

comp(17252..18097)
DNA (846bp) protein (282aa)
Transposition helper protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T1AAL0_9ZZZZ rbh
Transposition helper protein {ECO:0000313|EMBL:EQD54072.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
transposase-associated IstB-like ATP-binding protein
13_1_20cm_4_scaffold_1130_25

Not on your lists

comp(18094..18780)
DNA (687bp) protein (229aa)
Integrase catalytic region n=1 Tax=mine drainage metagenome RepID=T1ATZ0_9ZZZZ
Integrase catalytic region {ECO:0000313|EMBL:EQD64066.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
transposase, putative
Displaying 26 items

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