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13_1_20cm_4_scaffold_201

Search features with annotation key words

Displaying 26 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_201_1
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

75..833
DNA (759bp) protein (253aa)
short-chain alcohol dehydrogenase Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
Short-chain dehydrogenase id=2247805 bin=GWA2_Methylomirabilis_73_35 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
short-chain dehydrogenase rbh
13_1_20cm_4_scaffold_201_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

919..1722
DNA (804bp) protein (268aa)
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TVD4_9CHLR
sensor histidine kinase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
putative two-component sensor histidine kinase protein
13_1_20cm_4_scaffold_201_3
unknown

Not on your lists

comp(1744..1992)
DNA (249bp) protein (83aa)

This feature has no annotations

13_1_20cm_4_scaffold_201_4
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

2130..3770
DNA (1641bp) protein (547aa)
General secretion pathway protein A n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKT1_9BACT
General secretion pathway protein A {ECO:0000313|EMBL:CBE67730.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;
exeA; General secretion pathway protein A
13_1_20cm_4_scaffold_201_5
Zea mays, Zea, Poales, commelinids, Streptophyta, Viridiplantae

Not on your lists

3770..4633
DNA (864bp) protein (288aa)
Lysine-rich arabinogalactan protein 19 n=1 Tax=Arabidopsis thaliana RepID=AGP19_ARATH
Uncharacterized protein {ECO:0000313|EnsemblPlants:GRMZM5G883759_P01}; TaxID=4577 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida;
Fe-S oxidoreductase
13_1_20cm_4_scaffold_201_6
unknown

Not on your lists

4741..4956
DNA (216bp) protein (72aa)

This feature has no annotations

13_1_20cm_4_scaffold_201_7
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5100..5312
DNA (213bp) protein (71aa)
Dodecin n=1 Tax=Nitrosospira sp. APG3 RepID=M5DG69_9PROT
Dodecin {ECO:0000313|EMBL:CCU61193.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
13_1_20cm_4_scaffold_201_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5316..5810)
DNA (495bp) protein (165aa)
Cupin region n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IVF3_RHOP2
cupin region Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
cupin region
13_1_20cm_4_scaffold_201_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

5951..6334
DNA (384bp) protein (128aa)
GAF sensor hybrid histidine kinase (EC:2.7.13.3) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Putative Histidine kinase id=4726950 bin=GWC2_Methylomirabilis_70_24 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
CheY-like receiver, AAA-type ATPase and DNA-binding domain-containing response regulator
13_1_20cm_4_scaffold_201_10
unknown

Not on your lists

comp(6376..6666)
DNA (291bp) protein (97aa)

This feature has no annotations

13_1_20cm_4_scaffold_201_11
unknown

Not on your lists

6879..7205
DNA (327bp) protein (109aa)

This feature has no annotations

13_1_20cm_4_scaffold_201_12
unknown

Not on your lists

7404..7712
DNA (309bp) protein (103aa)

This feature has no annotations

13_1_20cm_4_scaffold_201_13
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

7760..8746
DNA (987bp) protein (329aa)
NADPH:quinone reductase (EC:1.6.5.5)
NADPH:quinone reductase n=1 Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VC82_9CYAN rbh
Alcohol dehydrogenase {ECO:0000313|EMBL:KIF37921.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
13_1_20cm_4_scaffold_201_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(8771..9343)
DNA (573bp) protein (191aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
13_1_20cm_4_scaffold_201_15
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

9513..9986
DNA (474bp) protein (158aa)
hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein id=14627341 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
13_1_20cm_4_scaffold_201_16
unknown

Not on your lists

comp(10571..11065)
DNA (495bp) protein (165aa)

This feature has no annotations

13_1_20cm_4_scaffold_201_17
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11441..12523)
DNA (1083bp) protein (361aa)
serA; D-3-phosphoglycerate dehydrogenase; K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95] Tax=GWD2_Deltaproteobacteria_55_8_curated
D-3-phosphoglycerate dehydrogenase id=1940935 bin=GWD2_Deltaproteobacteria_55_8 species=Thermosynechococcus elongatus genus=Thermosynechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria rbh
D-3-phosphoglycerate dehydrogenase
13_1_20cm_4_scaffold_201_18
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12613..13659
DNA (1047bp) protein (349aa)
putative amidohydrolase Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase id=4770810 bin=GWA2_Methylomirabilis_73_35 species=Mycobacterium xenopi genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase
13_1_20cm_4_scaffold_201_19
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

13656..14027
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00036EF67E
Globin {ECO:0000313|EMBL:ABJ88703.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin60
globin
13_1_20cm_4_scaffold_201_20
unknown

Not on your lists

14086..14322
DNA (237bp) protein (79aa)

This feature has no annotations

13_1_20cm_4_scaffold_201_21
unknown

Not on your lists

14353..14712
DNA (360bp) protein (120aa)

This feature has no annotations

13_1_20cm_4_scaffold_201_22
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

14709..15503
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Streptomyces vitaminophilus RepID=UPI00035E2EA1
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
hypothetical protein
13_1_20cm_4_scaffold_201_23
unknown

Not on your lists

comp(15525..15755)
DNA (231bp) protein (77aa)

This feature has no annotations

13_1_20cm_4_scaffold_201_24
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(16186..16659)
DNA (474bp) protein (158aa)
thioesterase-like protein Tax=GWA2_Rokubacteria_73_35_curated
4-hydroxybenzoyl-coa thioesterase
4-hydroxybenzoyl-CoA thioesterase id=2319309 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_201_25
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16682..17470)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FA97_CONWI
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
hypothetical protein
13_1_20cm_4_scaffold_201_26
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17575..18519
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI00035C4732
FAD linked oxidase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
FAD linked oxidase
Displaying 26 items

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