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13_1_20cm_4_scaffold_252

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Displaying items 1-30 of 39 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_252_1
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..205)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NU06_AFIFE
Bradyrhizobium elkanii strain UASWS1015 Contig176, whole genome shotgun sequence {ECO:0000313|EMBL:KIU48724.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
dppB; dipeptide transport system permease DppB
13_1_20cm_4_scaffold_252_2
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

307..1908
DNA (1602bp) protein (534aa)
family 5 extracellular solute-binding protein (EC:3.1.3.26); K02035 peptide/nickel transport system substrate-binding protein Tax=CSP1_6_Rokubacteria
family 5 extracellular solute-binding protein (EC:3.1.3.26); K02035 peptide/nickel transport system substrate-binding protein id=14625072 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10 rbh
family 5 extracellular solute-binding protein (EC:3.1.3.26)
13_1_20cm_4_scaffold_252_3
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

1954..2709
DNA (756bp) protein (252aa)
binding-protein-dependent transport system inner membrane protein (EC:3.6.3.24); K02033 peptide/nickel transport system permease protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
binding-protein-dependent transport system inner membrane protein (EC:3.6.3.24); K02033 peptide/nickel transport system permease protein id=14625071 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10 rbh
binding-protein-dependent transport system inner membrane protein (EC:3.6.3.24)
13_1_20cm_4_scaffold_252_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

2715..3542
DNA (828bp) protein (276aa)
binding-protein-dependent transport system inner membrane protein (EC:3.6.3.24); K02034 peptide/nickel transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
binding-protein-dependent transport system inner membrane protein (EC:3.6.3.24); K02034 peptide/nickel transport system permease protein id=14625070 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10 rbh
binding-protein-dependent transport system inner membrane protein (EC:3.6.3.24)
13_1_20cm_4_scaffold_252_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

3565..4665
DNA (1101bp) protein (367aa)
putative methionine synthase, vitamin-B12 independent (EC:2.1.1.14); K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_
putative methionine synthase, vitamin-B12 independent (EC:2.1.1.14)
Putative Methionine synthase, vitamin-B12 independent n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KYA2_THERP
13_1_20cm_4_scaffold_252_6
BJP_08E140C01_Syntrophobacterales_43_19, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4953..5285
DNA (333bp) protein (111aa)
Tax=BJP_08E140C01_Syntrophobacterales_43_19
13_1_20cm_4_scaffold_252_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

5404..6210
DNA (807bp) protein (269aa)
Polysaccharide deacetylase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CA38_SPHTD rbh
polysaccharide deacetylase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
polysaccharide deacetylase
13_1_20cm_4_scaffold_252_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6207..7355
DNA (1149bp) protein (383aa)
epoxide hydrolase (EC:3.3.2.9); K01253 microsomal epoxide hydrolase [EC:3.3.2.9] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein OPAG_01638 id=2521458 bin=GWC2_Methylomirabilis_70_16 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
Putative epoxide hydrolase
13_1_20cm_4_scaffold_252_9
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7352..8212
DNA (861bp) protein (287aa)
Immunogenic protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0GDT6_9BRAD
Immunogenic protein {ECO:0000313|EMBL:EJZ30760.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CC
immunogenic protein precursor
13_1_20cm_4_scaffold_252_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

8576..8761
DNA (186bp) protein (62aa)
4-oxalocrotonate tautomerase; K01821 4-oxalocrotonate tautomerase [EC:5.3.2.-] Tax=GWA2_Rokubacteria_73_35_curated
4-oxalocrotonate tautomerase id=4541114 bin=GWA2_Methylomirabilis_73_35 species=Azospirillum lipoferum genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
4-oxalocrotonate tautomerase
13_1_20cm_4_scaffold_252_11
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8851..10071
DNA (1221bp) protein (407aa)
General secretory pathway protein E n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B3B5_9PROT
General secretory pathway protein E {ECO:0000313|EMBL:BAN35142.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfu
general secretory pathway protein E
13_1_20cm_4_scaffold_252_12
Candidatus Magnetoovum chiemensis, Candidatus Magnetoovum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

10187..13216
DNA (3030bp) protein (1010aa)
Secreted protein containing Peptidase M10A and M12B, matrixin and adamalysin domain protein {ECO:0000313|EMBL:KJR40152.1}; EC=3.4.24.- {ECO:0000313|EMBL:KJR40152.1};; TaxID=1609970 species="Bacteria;
hypothetical protein
fibronectin type III domain-containing protein id=12557455 bin=CNBR_ACIDO species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_20cm_4_scaffold_252_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

13290..14711
DNA (1422bp) protein (474aa)
amidase Tax=GWA2_Rokubacteria_70_23_curated
Amidase id=4748893 bin=GWC2_Methylomirabilis_70_16 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
amidase
13_1_20cm_4_scaffold_252_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(14708..17050)
DNA (2343bp) protein (781aa)
molybdopterin binding aldehyde oxidase and xanthine dehydrogenase Tax=GWA2_Rokubacteria_73_35_curated
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding id=1863209 bin=GWA2_Methylomirabilis_73_35 species=Methylobacterium radiotolerans genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
carbon-monoxide dehydrogenase large subunit, coxL-like protein
13_1_20cm_4_scaffold_252_15
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17174..18391
DNA (1218bp) protein (406aa)
putative branched-chain amino acid ABC transporter periplasmic-binding protein Tax=RBG_16_Deltaproteobacteria_49_23_curated
Extracellular ligand-binding receptor id=3109556 bin=GWC2_Syntrophus__56_31 species=Afipia broomeae genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
Extracellular ligand-binding receptor
13_1_20cm_4_scaffold_252_16
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

18401..19285
DNA (885bp) protein (295aa)
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
Inner-membrane translocator id=3051819 bin=GWF2_Methylomirabilis_70_14 species=Afipia broomeae genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
permease of ABC transporter protein
13_1_20cm_4_scaffold_252_17
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19344..20306
DNA (963bp) protein (321aa)
branched-chain amino acid transport permease; K01998 branched-chain amino acid transport system permease protein Tax=RBG_16_Deltaproteobacteria_49_23_curated
Inner-membrane translocator id=4149483 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good rbh
inner-membrane translocator
13_1_20cm_4_scaffold_252_18
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

20287..21468
DNA (1182bp) protein (394aa)
acyl-CoA dehydrogenase (EC:1.3.99.-) Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003656D0F rbh
acyl-CoA dehydrogenase domain-containing protein
13_1_20cm_4_scaffold_252_19
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21490..22953
DNA (1464bp) protein (488aa)
Possible trehalose/maltose binding protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4ES34_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:ETW92856.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family
13_1_20cm_4_scaffold_252_20
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

22958..23881
DNA (924bp) protein (308aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Desulfovibrio aespoeensis (strain ATCC 700646 / DSM 10631 / Aspo-2) RepID=E6VTH8_DESAO
putative ABC transporter, permease protein Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
binding-protein-dependent transporter inner membrane component
13_1_20cm_4_scaffold_252_21
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

23878..24738
DNA (861bp) protein (287aa)
Putative sugar ABC transporter, permease protein n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N9Y9_RHOPA
binding-protein-dependent transport system inner membrane protein; K02026 multiple sugar transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
sugar ABC transporter permease
13_1_20cm_4_scaffold_252_22
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

24765..25832
DNA (1068bp) protein (356aa)
Carbohydrate ABC transporter ATP-binding protein, CUT1 family n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SJ69_THEM7
sugar ABC transporter ATP-binding protein; K10112 maltose/maltodextrin transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
sugar ABC transporter ATP-binding protein
13_1_20cm_4_scaffold_252_23
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

25829..26584
DNA (756bp) protein (252aa)
dehydrogenase (EC:1.1.1.36 1.1.1.100) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Uncharacterized protein n=1 Tax=Clostridium pasteurianum BC1 RepID=R4KB28_CLOPA
short chain dehydrogenase
13_1_20cm_4_scaffold_252_24
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

26817..27914
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Colletotrichum orbiculare (strain 104-T / ATCC 96160 / CBS 514.97 / LARS 414 / MAFF 240422) RepID=N4UWZ0_COLOR
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
hypothetical protein
13_1_20cm_4_scaffold_252_25
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28332..29042)
DNA (711bp) protein (237aa)
ABC transporter related n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUF3_RUBXD
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RBG_13_Deltaproteobacteria_51_10_curated
ABC transporter-like protein
13_1_20cm_4_scaffold_252_26
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29039..29788)
DNA (750bp) protein (250aa)
ATP-binding component of ABC transporter protein n=1 Tax=Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50) RepID=Q7WIU3_BORBR
Branched-chain amino acid ABC transporter {ECO:0000313|EMBL:KDD53155.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bor
ABC transporter ATP-binding protein
13_1_20cm_4_scaffold_252_27
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

29914..30063
DNA (150bp) protein (50aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJG2_KORVE
Uncharacterized protein {ECO:0000313|EMBL:ABF42988.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
hypothetical protein
13_1_20cm_4_scaffold_252_28
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(30092..30475)
DNA (384bp) protein (128aa)
hypothetical protein; K07793 putative tricarboxylic transport membrane protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Tricarboxylate transport membrane protein id=4827673 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
transporter
13_1_20cm_4_scaffold_252_29
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

30673..30909
DNA (237bp) protein (79aa)
Uncharacterized protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
13_1_20cm_4_scaffold_252_30
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(31478..31921)
DNA (444bp) protein (148aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
id=3360388 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Displaying items 1-30 of 39 in total

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