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13_1_20cm_4_scaffold_299

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Displaying items 1-30 of 47 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_299_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2..1012)
DNA (1011bp) protein (337aa)
porD-like; pyruvate synthase subunit delta (EC:1.2.7.1); K00171 pyruvate ferredoxin oxidoreductase, delta subunit [EC:1.2.7.1] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Orf c01004 protein id=2591423 bin=GWC2_Methylomirabilis_70_16 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
pyruvate ferredoxin/flavodoxin oxidoreductase subunit delta
13_1_20cm_4_scaffold_299_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1104..1772)
DNA (669bp) protein (223aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=3861040 bin=GWC2_Methylomirabilis_70_16 species=Paenibacillus mucilaginosus genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
flavin-nucleotide-binding protein
13_1_20cm_4_scaffold_299_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1769..2347)
DNA (579bp) protein (193aa)
SNO glutamine amidotransferase; K08681 glutamine amidotransferase [EC:2.6.-.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glutamine amidotransferase subunit PdxT id=2940470 bin=GWA2_Methylomirabilis_73_35 species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2
13_1_20cm_4_scaffold_299_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2362..3258)
DNA (897bp) protein (299aa)
pyridoxal biosynthesis lyase PdxS; K06215 pyridoxine biosynthesis protein [EC:4.-.-.-] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Pyridoxal biosynthesis lyase PdxS id=2591425 bin=GWC2_Methylomirabilis_70_16 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
pyridoxal biosynthesis lyase PdxS
13_1_20cm_4_scaffold_299_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3378..4937)
DNA (1560bp) protein (520aa)
GntR family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Transcriptional regulator, GntR family with aminotransferase domain protein id=2591427 bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
GntR family transcriptional regulator
13_1_20cm_4_scaffold_299_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

5065..5178
DNA (114bp) protein (38aa)
id=2591429 Tax=GWC2_Rokubacteria_70_16_curated
id=2591429 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_20cm_4_scaffold_299_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

5179..5364
DNA (186bp) protein (62aa)
id=3741115 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
id=2591430 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_20cm_4_scaffold_299_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

5450..5629
DNA (180bp) protein (60aa)
Putative uncharacterized protein Tax=GWA2_Rokubacteria_73_35_curated
Putative uncharacterized protein id=4306265 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_299_9
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5634..6380)
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI0002FD98F0
Uncharacterized protein {ECO:0000313|EMBL:ETX04304.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
MerR family transcriptional regulator
13_1_20cm_4_scaffold_299_10
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6364..6675)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XVX3_SORCE
Uncharacterized protein {ECO:0000313|EMBL:AGP34758.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
hypothetical protein
13_1_20cm_4_scaffold_299_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(6770..7150)
DNA (381bp) protein (127aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein id=4306254 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_299_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(7170..8585)
DNA (1416bp) protein (472aa)
amidase; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=GWA2_Rokubacteria_73_35_curated
amidase (EC:3.5.1.4)
Amidase id=4306251 bin=GWA2_Methylomirabilis_73_35 species=Pseudonocardia dioxanivorans genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_299_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(8585..8740)
DNA (156bp) protein (52aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein id=4306247 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_299_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

8769..9965
DNA (1197bp) protein (399aa)
ferredoxin Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative ferredoxin id=3980009 bin=GWC2_Methylomirabilis_70_16 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
metal-binding protein
13_1_20cm_4_scaffold_299_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

9931..10542
DNA (612bp) protein (204aa)
ferredoxin Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative ferredoxin id=4306243 bin=GWA2_Methylomirabilis_73_35 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ferredoxin
13_1_20cm_4_scaffold_299_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

10539..11393
DNA (855bp) protein (285aa)
acyl dehydratase Tax=GWA2_Rokubacteria_73_35_curated
MaoC-like dehydratase id=4306188 bin=GWA2_Methylomirabilis_73_35 species=Patulibacter medicamentivorans genus=Patulibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dehydratase
13_1_20cm_4_scaffold_299_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11390..12412
DNA (1023bp) protein (341aa)
uroporphyrinogen decarboxylase (URO-D); K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uroporphyrinogen decarboxylase id=4306186 bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus basilensis genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
uroporphyrinogen decarboxylase
13_1_20cm_4_scaffold_299_18
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(12418..13497)
DNA (1080bp) protein (360aa)
GTP-dependent nucleic acid-binding protein EngD; K06942 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
GTP-binding protein YchF id=4306184 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GTP-dependent nucleic acid-binding protein EngD
13_1_20cm_4_scaffold_299_19
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

13537..14433
DNA (897bp) protein (299aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=14627552 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_20cm_4_scaffold_299_20
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

14472..14837
DNA (366bp) protein (122aa)
7-cyano-7-deazaguanine reductase; K09457 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
NADPH-dependent 7-cyano-7-deazaguanine reductase id=4306181 bin=GWA2_Methylomirabilis_73_35 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
7-cyano-7-deazaguanine reductase
13_1_20cm_4_scaffold_299_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(14842..15708)
DNA (867bp) protein (289aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Membrane protein id=3692272 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Halothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
hypothetical protein
13_1_20cm_4_scaffold_299_22
GWA2_WOR_2_45_18_curated, WOR-2, Bacteria

Not on your lists

comp(15727..16686)
DNA (960bp) protein (320aa)
Glycosyl transferase family 2 n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9VZT3_9CYAN
glycosyl transferase family protein Tax=GWA2_WOR_2_45_18_curated
family 2 glycosyl transferase
13_1_20cm_4_scaffold_299_23
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16683..17894)
DNA (1212bp) protein (404aa)
hypothetical protein n=1 Tax=Pseudanabaena sp. PCC 6802 RepID=UPI000344A7BF rbh
DegT/DnrJ/EryC1/StrS aminotransferase {ECO:0000313|EMBL:ABQ26529.1}; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geoba
DegT/DnrJ/EryC1/StrS aminotransferase
13_1_20cm_4_scaffold_299_24
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

comp(17891..18496)
DNA (606bp) protein (202aa)
galactoside O-acetyltransferase (EC:2.3.1.18)
hypothetical protein n=1 Tax=Pseudanabaena sp. PCC 6802 RepID=UPI00037A4F26
Acetyltransferase {ECO:0000313|EMBL:KDA53270.1}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
13_1_20cm_4_scaffold_299_25
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(18493..19797)
DNA (1305bp) protein (435aa)
ABC transporter related protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G419_GEOUR rbh
ABC transporter-like protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
ABC transporter-like protein
13_1_20cm_4_scaffold_299_26
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(19801..20643)
DNA (843bp) protein (281aa)
ABC-2 type transporter n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01XL6_SOLUE
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter us
ABC-2 type transporter
13_1_20cm_4_scaffold_299_27
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(20725..21657)
DNA (933bp) protein (311aa)
zinc-containing alcohol dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Alcohol dehydrogenase, zinc-containing id=2278573 bin=GWA2_Elusimicrobia_69_24 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
zinc-containing alcohol dehydrogenase
13_1_20cm_4_scaffold_299_28
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(21901..22668)
DNA (768bp) protein (256aa)
short-chain dehydrogenase/reductase SDR Tax=GWA2_Elusimicrobia_69_24_curated
Short-chain dehydrogenase/reductase SDR id=2278571 bin=GWA2_Elusimicrobia_69_24 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
2-deoxy-D-gluconate 3-dehydrogenase
13_1_20cm_4_scaffold_299_29
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(22665..24461)
DNA (1797bp) protein (599aa)
long-chain fatty-acid-CoA ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] Tax=GWA2_Elusimicrobia_69_24_curated
AMP-dependent synthetase and ligase id=2278568 bin=GWA2_Elusimicrobia_69_24 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
long-chain fatty-acid-CoA ligase
13_1_20cm_4_scaffold_299_30
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

24622..25233
DNA (612bp) protein (204aa)
id=14626096 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Tax=CSP1_6_Rokubacteria
Displaying items 1-30 of 47 in total

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