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13_1_20cm_4_scaffold_353

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Displaying items 1-30 of 42 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_353_1
R_NC10_66_22, NC10, Bacteria

Not on your lists

1..894
DNA (894bp) protein (298aa)
asparagine synthase (EC:6.3.5.4); K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
asparagine synthase (EC:6.3.5.4)
Asparagine synthetase id=4546756 bin=GWA2_Methylomirabilis_73_35 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_353_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

902..3034
DNA (2133bp) protein (711aa)
glycosyl transferase Tax=GWA2_Rokubacteria_73_35_curated
Predicted glycosyl transferase, group 1 id=4546757 bin=GWA2_Methylomirabilis_73_35 species=Azospirillum sp. genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycosyl transferase
13_1_20cm_4_scaffold_353_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3031..4197
DNA (1167bp) protein (389aa)
glycosyltransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glycosyl transferase, group 1 id=4546758 bin=GWA2_Methylomirabilis_73_35 species=Oscillatoria acuminata genus=Oscillatoria taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
group 1 glycosyl transferase
13_1_20cm_4_scaffold_353_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

4320..5075
DNA (756bp) protein (252aa)
methyltransferase type 11 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ubiG3; 3-demethylubiquinone-9 3-methyltransferase id=14627094 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Omnitrophica tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_20cm_4_scaffold_353_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

5075..6562
DNA (1488bp) protein (496aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=4546759 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_353_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6559..7263
DNA (705bp) protein (235aa)
WbqC-like family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4059722 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
WbqC-like family protein
13_1_20cm_4_scaffold_353_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

7331..7945
DNA (615bp) protein (205aa)
LmbE family protein Tax=GWA2_Rokubacteria_73_35_curated
LmbE family protein id=4059721 bin=GWA2_Methylomirabilis_73_35 species=Acidothermus cellulolyticus genus=Acidothermus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_353_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7942..8979
DNA (1038bp) protein (346aa)
putative uDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC:2.6.1.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
putative uDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC:2.6.1.-)
Putative UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase id=4059720 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_353_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8979..10133
DNA (1155bp) protein (385aa)
glycosyl transferase family protein; K13685 UDP-N-acetylglucosamine:undecaprenyl-P N-acetylglucosaminyl 1-P transferase [EC:2.7.8.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase id=4059719 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycosyl transferase family protein
13_1_20cm_4_scaffold_353_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10133..10627
DNA (495bp) protein (165aa)
hypothetical protein; K09928 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=4059718 bin=GWA2_Methylomirabilis_73_35 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_353_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10664..11542
DNA (879bp) protein (293aa)
galU; glucose-1-phosphate uridylyltransferase (EC:2.7.7.9) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
galU; UTP-glucose-1-phosphate uridylyltransferase (EC:2.7.7.9); K00963 UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] id=14625246 bin=bin7_NC10_sister species=Dictyoglomus thermophilum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=bin7_NC10_sister organism_group=NC10
galU; UTP-glucose-1-phosphate uridylyltransferase (EC:2.7.7.9)
13_1_20cm_4_scaffold_353_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11719..12798
DNA (1080bp) protein (360aa)
Quinolinate phosphoribosyl transferase; K00763 nicotinate phosphoribosyltransferase [EC:2.4.2.11] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
nicotinate phosphoribosyltransferase (EC:2.4.2.11); K00763 nicotinate phosphoribosyltransferase [EC:2.4.2.11] id=14627084 bin=bin7_NC10_sister species=Methanobacterium sp. Maddingley MBC34 genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
nicotinate phosphoribosyltransferase
13_1_20cm_4_scaffold_353_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12798..13712
DNA (915bp) protein (305aa)
indole-3-glycerol-phosphate synthase (EC:4.1.1.48); K01609 indole-3-glycerol phosphate synthase [EC:4.1.1.48] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
indole-3-glycerol phosphate synthase (EC:4.1.1.48)
Indole-3-glycerol phosphate synthase id=4059714 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_353_14
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

13709..14365
DNA (657bp) protein (219aa)
N-(5'-phosphoribosyl)anthranilate isomerase; K01817 phosphoribosylanthranilate isomerase [EC:5.3.1.24] Tax=CSP1_6_Rokubacteria
N-(5'-phosphoribosyl)anthranilate isomerase; K01817 phosphoribosylanthranilate isomerase [EC:5.3.1.24] id=14627082 bin=bin7_NC10_sister species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10 rbh
trpF; N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC:5.3.1.24)
13_1_20cm_4_scaffold_353_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

14362..15573
DNA (1212bp) protein (404aa)
trpB; tryptophan synthase subunit beta (EC:4.2.1.20) Tax=GWA2_Rokubacteria_73_35_curated
tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain id=4059712 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_353_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

15570..16376
DNA (807bp) protein (269aa)
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20); K01695 tryptophan synthase alpha chain [EC:4.2.1.20] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
trpA; tryptophan synthase alpha chain (EC:4.2.1.20)
Tryptophan synthase alpha chain id=4082180 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_353_17
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

16852..17076
DNA (225bp) protein (75aa)
accD; acetyl-CoA carboxylase, carboxyl transferase subunit beta; K01963 acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2] Tax=CSP1_6_Rokubacteria
accD; acetyl-CoA carboxylase, carboxyl transferase subunit beta; K01963 acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2] id=14627079 bin=bin7_NC10_sister species=Leptospirillum ferrodiazotrophum genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
accD; acetyl-CoA carboxylase subunit beta (EC:6.4.1.2)
13_1_20cm_4_scaffold_353_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

17073..18371
DNA (1299bp) protein (433aa)
FolC bifunctional protein; K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Bifunctional protein FolC: Folylpolyglutamate synthase and Dihydrofolate synthase id=3240645 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
FolC bifunctional protein
13_1_20cm_4_scaffold_353_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

18399..20570
DNA (2172bp) protein (724aa)
organic solvent tolerance protein; K04744 LPS-assembly protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
organic solvent tolerance protein; K04744 LPS-assembly protein id=14627077 bin=bin7_NC10_sister species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10 rbh
organic solvent tolerance protein
13_1_20cm_4_scaffold_353_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

20567..21499
DNA (933bp) protein (311aa)
DegT/DnrJ/EryC1/StrS aminotransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
DegT/DnrJ/EryC1/StrS family protein id=14627076 bin=bin7_NC10_sister species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=bin7_NC10_sister organism_group=NC10
DegT/DnrJ/EryC1/StrS aminotransferase
13_1_20cm_4_scaffold_353_21
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

21540..22865
DNA (1326bp) protein (442aa)
UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
nucleotide sugar dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Nucleotide-sugar dehydrogenase id=4811707 bin=GWC2_Methylomirabilis_70_24 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_20cm_4_scaffold_353_22
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

22873..23766
DNA (894bp) protein (298aa)
UbiA prenyltransferase Tax=GWA2_Rokubacteria_70_23_curated
Putative conserved membrane protein id=4756383 bin=GWA2_Methylomirabilis_73_35 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
4-hydroxybenzoate polyprenyltransferase
13_1_20cm_4_scaffold_353_23
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

23717..24733
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LEF1_THEPS
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_20cm_4_scaffold_353_24
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

24826..26220
DNA (1395bp) protein (465aa)
glutamyl-tRNA synthetase; K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] Tax=GWA2_Rokubacteria_73_35_curated
Glutamate--tRNA ligase id=4756400 bin=GWA2_Methylomirabilis_73_35 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glutamyl-tRNA synthetase
13_1_20cm_4_scaffold_353_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

26217..26867
DNA (651bp) protein (217aa)
phosphoglycerate mutase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Fructose-2,6-bisphosphatase id=4756401 bin=GWA2_Methylomirabilis_73_35 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
alpha-ribazole phosphatase
13_1_20cm_4_scaffold_353_26
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

26864..28468
DNA (1605bp) protein (535aa)
Na/Pi-cotransporter II-like protein; K03324 phosphate:Na+ symporter Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Na/Pi-cotransporter II-related protein id=4082207 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Na/Pi-cotransporter
13_1_20cm_4_scaffold_353_27
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

28703..29041
DNA (339bp) protein (113aa)
glnB; nitrogen regulatory protein P-II; K04751 nitrogen regulatory protein P-II 1 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Nitrogen regulatory protein P-II id=4756404 bin=GWA2_Methylomirabilis_73_35 species=Deferribacter desulfuricans genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glnB; nitrogen regulatory protein P-II
13_1_20cm_4_scaffold_353_28
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

29251..32109
DNA (2859bp) protein (953aa)
glutamate-ammonia ligase adenylyltransferase; K00982 glutamate-ammonia-ligase adenylyltransferase [EC:2.7.7.42] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glutamate-ammonia-ligase adenylyltransferase ([Glutamate--ammonia-ligase] adenylyltransferase) (Glutamine-synthetase adenylyltransferase) (ATase) (EC:2.7.7.42)
Glutamate-ammonia-ligase adenylyltransferase id=4082217 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
13_1_20cm_4_scaffold_353_29
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

32106..34691
DNA (2586bp) protein (862aa)
DNA polymerase I (EC:2.7.7.7); K02335 DNA polymerase I [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
DNA polymerase I (EC:2.7.7.7)
DNA polymerase id=2399886 bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_353_30
unknown

Not on your lists

comp(34660..35646)
DNA (987bp) protein (329aa)

This feature has no annotations

Displaying items 1-30 of 42 in total

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