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13_1_20cm_4_scaffold_367

Search features with annotation key words

Displaying items 1-30 of 43 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_367_trna_2
unknown

Not on your lists

comp(46..121)
DNA (76bp)
transferRNA
13_1_20cm_4_scaffold_367_1
unknown

Not on your lists

comp(146..841)
DNA (696bp) protein (232aa)

This feature has no annotations

13_1_20cm_4_scaffold_367_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(918..1283)
DNA (366bp) protein (122aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_20cm_4_scaffold_367_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(1280..1525)
DNA (246bp) protein (82aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
13_1_20cm_4_scaffold_367_4
unknown

Not on your lists

comp(1662..2417)
DNA (756bp) protein (252aa)

This feature has no annotations

13_1_20cm_4_scaffold_367_trna_1
unknown

Not on your lists

comp(2688..2760)
DNA (73bp)
transferRNA
13_1_20cm_4_scaffold_367_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3013..4353)
DNA (1341bp) protein (447aa)
adenylosuccinate synthase; K01939 adenylosuccinate synthase [EC:6.3.4.4] Tax=GWA2_Rokubacteria_73_35_curated
Adenylosuccinate synthetase id=3779771 bin=GWA2_Methylomirabilis_73_35 species=Leptospirillum ferrooxidans genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
adenylosuccinate synthase
13_1_20cm_4_scaffold_367_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(4346..4903)
DNA (558bp) protein (186aa)
hisZ; ATP phosphoribosyltransferase regulatory subunit Tax=GWA2_Rokubacteria_73_35_curated
ATP phosphoribosyltransferase regulatory subunit id=3779772 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hisZ; ATP phosphoribosyltransferase regulatory subunit
13_1_20cm_4_scaffold_367_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(5507..6130)
DNA (624bp) protein (208aa)
phosphoglycerate mutase Tax=GWA2_Rokubacteria_73_35_curated
Phosphoglycerate mutase id=3779774 bin=GWA2_Methylomirabilis_73_35 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
phosphoglycerate mutase
13_1_20cm_4_scaffold_367_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(6175..7317)
DNA (1143bp) protein (381aa)
sga; Serine-glyoxylate aminotransferase (EC:2.6.1.45) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
sga; Serine-glyoxylate aminotransferase (EC:2.6.1.45)
Serine-glyoxylate aminotransferase id=3779775 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_367_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7328..8839)
DNA (1512bp) protein (504aa)
SagB-type dehydrogenase domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=4599711 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_20cm_4_scaffold_367_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8849..9868)
DNA (1020bp) protein (340aa)
methylthioribose-1-phosphate isomerase (EC:5.3.1.23); K08963 methylthioribose-1-phosphate isomerase [EC:5.3.1.23] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
methylthioribose-1-phosphate isomerase (EC:5.3.1.23)
Methylthioribose-1-phosphate isomerase id=3779777 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_367_11
unknown

Not on your lists

comp(9875..10231)
DNA (357bp) protein (119aa)

This feature has no annotations

13_1_20cm_4_scaffold_367_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(10270..10542)
DNA (273bp) protein (91aa)
UPF0235 protein Cwoe_5214 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEC8_CONWI
hypothetical protein; K09131 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_20cm_4_scaffold_367_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(10529..11008)
DNA (480bp) protein (160aa)
hypothetical protein; K04074 cell division initiation protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
DivIVA family protein id=3884504 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cell division protein DivIVA
13_1_20cm_4_scaffold_367_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(11025..11330)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8ABM7_THEID
hypothetical protein; K02221 YggT family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_20cm_4_scaffold_367_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(11345..12172)
DNA (828bp) protein (276aa)
proC; pyrroline-5-carboxylate reductase (EC:1.5.1.2); K00286 pyrroline-5-carboxylate reductase [EC:1.5.1.2] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
proC; pyrroline-5-carboxylate reductase (EC:1.5.1.2); K00286 pyrroline-5-carboxylate reductase [EC:1.5.1.2] id=14625495 bin=bin7_NC10_sister species=Deferribacter desulfuricans genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=bin7_NC10_sister organism_group=NC10
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
13_1_20cm_4_scaffold_367_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(12169..12690)
DNA (522bp) protein (174aa)
hypothetical protein; K06997 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein; K06997 id=14625496 bin=bin7_NC10_sister species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
pyridoxal phosphate enzyme, YggS family
13_1_20cm_4_scaffold_367_17
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(12721..13515)
DNA (795bp) protein (265aa)
hypothetical protein; K05810 conserved hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
Putative uncharacterized protein id=4191401 bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_367_18
GWD2_Elusimicrobia_63_28_curated, Elusimicrobia, Bacteria

Not on your lists

13567..16896
DNA (3330bp) protein (1110aa)
hypothetical protein Tax=GWD2_Elusimicrobia_63_28_curated
Putative uncharacterized protein id=4697464 bin=GWA2_Elusimicrobia_51_34 species=Leeuwenhoekiella blandensis genus=Leeuwenhoekiella taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia rbh
WD repeat-containing protein
13_1_20cm_4_scaffold_367_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(16903..18063)
DNA (1161bp) protein (387aa)
ftsZ; cell division protein ftsZ Tax=GWA2_Rokubacteria_73_35_curated
Cell division protein FtsZ id=4191402 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ftsZ; cell division protein ftsZ
13_1_20cm_4_scaffold_367_20
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(18131..19276)
DNA (1146bp) protein (382aa)
cell division protein FtsA; K03590 cell division protein FtsA Tax=GWA2_Rokubacteria_73_35_curated
Cell division protein ftsA id=4191403 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ftsA; cell division protein FtsA
13_1_20cm_4_scaffold_367_21
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(19375..20250)
DNA (876bp) protein (292aa)
polypeptide-transport-associated domain-containing protein; K03589 cell division protein FtsQ Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Polypeptide-transport-associated domain protein FtsQ-type id=4191404 bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
polypeptide-transport-associated domain-containing protein
13_1_20cm_4_scaffold_367_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(20243..21121)
DNA (879bp) protein (293aa)
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158); K00075 UDP-N-acetylmuramate dehydrogenase [EC:1.1.1.158] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
UDP-N-acetylenolpyruvoylglucosamine reductase id=4191405 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
murB; UDP-N-acetylenolpyruvoylglucosamine reductase
13_1_20cm_4_scaffold_367_23
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(21115..22515)
DNA (1401bp) protein (467aa)
murC; UDP-N-acetylmuramate--L-alanine ligase; K01924 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
murC; UDP-N-acetylmuramate--L-alanine ligase; K01924 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] id=14625504 bin=bin7_NC10_sister species=Geobacter daltonii genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
murC; UDP-N-acetylmuramate--L-alanine ligase
13_1_20cm_4_scaffold_367_24
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(22508..23605)
DNA (1098bp) protein (366aa)
stage V sporulation protein E; K03588 cell division protein FtsW Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
stage V sporulation protein E; K03588 cell division protein FtsW id=14625505 bin=bin7_NC10_sister species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
stage V sporulation protein E
13_1_20cm_4_scaffold_367_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(23834..25237)
DNA (1404bp) protein (468aa)
murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; K01925 UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
UDP-N-acetylmuramoylalanine--D-glutamate ligase id=4599628 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Desulforudis audaxviator genus=Candidatus Desulforudis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
13_1_20cm_4_scaffold_367_26
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(25275..26135)
DNA (861bp) protein (287aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13); K01000 phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Phospho-N-acetylmuramoyl-pentapeptide-transferase id=3503978 bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase
13_1_20cm_4_scaffold_367_27
unknown

Not on your lists

26224..26688
DNA (465bp) protein (155aa)

This feature has no annotations

13_1_20cm_4_scaffold_367_28
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

27043..27525
DNA (483bp) protein (161aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Displaying items 1-30 of 43 in total

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