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13_1_20cm_4_scaffold_394

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_394_1
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(209..736)
DNA (528bp) protein (176aa)
copper transporter n=1 Tax=Singulisphaera acidiphila RepID=UPI00036BE259
Thioredoxin reductase {ECO:0000313|EMBL:AGA28256.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidi
thioredoxin reductase
13_1_20cm_4_scaffold_394_2
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(782..904)
DNA (123bp) protein (41aa)
Cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:ABS27498.1}; EC=1.8.1.9 {ECO:0000313|EMBL:ABS27498.1};; TaxID=404589 species="Bacteria; Proteo
Cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HFK2_ANADF
cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulfide oxidoreductase
13_1_20cm_4_scaffold_394_3
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

977..2980
DNA (2004bp) protein (668aa)
penicillin-binding protein (EC:2.4.1.129) Tax=RBG_16_Actinobacteria_67_10_curated
Multimodular transpeptidase-transglycosylase id=4189553 bin=GWC2_Nitrospirae_57_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
multimodular transpeptidase-transglycosylase
13_1_20cm_4_scaffold_394_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2990..3304)
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003709E65
Cupin 2 barrel domain-containing protein Tax=GWA2_Rokubacteria_73_35_curated
cupin
13_1_20cm_4_scaffold_394_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3383..4441)
DNA (1059bp) protein (353aa)
Extradiol ring-cleavage dioxygenase class III protein subunit B n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CW32_PSEUX
extradiol ring-cleavage dioxygenase class III protein subunit B Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
extradiol ring-cleavage dioxygenase class III protein subunit B
13_1_20cm_4_scaffold_394_6
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4641..5576
DNA (936bp) protein (312aa)
aminocarboxymuconate-semialdehyde decarboxylase; K03392 aminocarboxymuconate-semialdehyde decarboxylase [EC:4.1.1.45] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
aminocarboxymuconate-semialdehyde decarboxylase (EC:4.1.1.45)
Tat (Twin-arginine translocation) pathway signal sequence n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HM04_9BRAD
13_1_20cm_4_scaffold_394_7
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5566..6300)
DNA (735bp) protein (245aa)
Alpha/beta family hydrolase n=1 Tax=Achromobacter piechaudii HLE RepID=J4J713_9BURK
alpha/beta family hydrolase Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
alpha/beta hydrolase fold family protein
13_1_20cm_4_scaffold_394_8
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6344..6997)
DNA (654bp) protein (218aa)
Uncharacterized protein {ECO:0000313|EMBL:AGB21602.1}; TaxID=710686 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis JS623.;"
ZTL id=3636062 bin=GWF2_Methylomirabilis_70_14 species=Mycobacterium smegmatis genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_394_9
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(6990..7379)
DNA (390bp) protein (130aa)
prevent-host-death family protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Uncharacterized protein id=4699220 bin=GWC2_Methylomirabilis_70_24 species=Mycobacterium smegmatis genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
prevent-host-death family protein
13_1_20cm_4_scaffold_394_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7477..9108
DNA (1632bp) protein (544aa)
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B06 RepID=UPI000362C241 rbh
radical SAM domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
radical SAM domain-containing protein
13_1_20cm_4_scaffold_394_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(9053..9373)
DNA (321bp) protein (107aa)
cupin n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=UPI000374F89A
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_20cm_4_scaffold_394_12
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

9400..10371
DNA (972bp) protein (324aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CBS0_THET1
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein {ECO:0000313|EMBL:ACZ42235.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 /
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
13_1_20cm_4_scaffold_394_13
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

10431..11462
DNA (1032bp) protein (344aa)
putative 2-dehydropantoate 2-reductase Tax=GWC2_Rokubacteria_70_16_curated
2-dehydropantoate 2-reductase id=3964573 bin=GWC2_Methylomirabilis_70_16 species=Variovorax sp. CF313 genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative 2-dehydropantoate 2-reductase
13_1_20cm_4_scaffold_394_14
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11638..11997
DNA (360bp) protein (120aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX08571.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Cold-shock DNA-binding domain protein id=1956127 bin=GWD2_Deltaproteobacteria_55_8 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
alkyl hydroperoxide reductase
13_1_20cm_4_scaffold_394_15
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12027..13217
DNA (1191bp) protein (397aa)
Amidase, hydantoinase/carbamoylase family {ECO:0000313|EMBL:CDX32205.1}; EC=3.5.1.87 {ECO:0000313|EMBL:CDX32205.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Ph
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030E8726 rbh
allantoate amidohydrolase
13_1_20cm_4_scaffold_394_16
unknown

Not on your lists

13224..13706
DNA (483bp) protein (161aa)

This feature has no annotations

13_1_20cm_4_scaffold_394_17
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13725..14408
DNA (684bp) protein (228aa)
Protocatechuate 3,4-dioxygenase, beta subunit n=1 Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3Q3H2_STANL
Protocatechuate 3,4-dioxygenase, beta subunit {ECO:0000313|EMBL:ADD42013.1}; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia n
protocatechuate 3,4-dioxygenase subunit beta
13_1_20cm_4_scaffold_394_18
Amycolatopsis decaplanina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14405..14959
DNA (555bp) protein (185aa)
Protocatechuate 3,4-dioxygenase subunit alpha n=1 Tax=Amycolatopsis decaplanina DSM 44594 RepID=M2XB89_9PSEU
Protocatechuate 3,4-dioxygenase subunit alpha {ECO:0000313|EMBL:EME58401.1}; TaxID=1284240 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatop
pcaG; protocatechuate 3,4-dioxygenase, alpha subunit
13_1_20cm_4_scaffold_394_19
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14979..16307
DNA (1329bp) protein (443aa)
3-carboxy-cis,cis-muconate cycloisomerase PcaB {ECO:0000313|EMBL:AJK48179.1}; EC=5.5.1.2 {ECO:0000313|EMBL:AJK48179.1};; TaxID=595500 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderi
pcaB; 3-carboxy-cis,cis-muconate cycloisomerase PcaB (EC:5.5.1.2)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00036EB25A
13_1_20cm_4_scaffold_394_20
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(16313..16519)
DNA (207bp) protein (69aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
Putative uncharacterized protein id=4202731 bin=GWA2_Methylomirabilis_73_35 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_394_21
RBG_16_Deltaproteobacteria_50_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16835..17413)
DNA (579bp) protein (193aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H7S5_ANADF
hypothetical protein Tax=RBG_16_Deltaproteobacteria_50_11_curated
hypothetical protein
13_1_20cm_4_scaffold_394_22
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17401..18567)
DNA (1167bp) protein (389aa)
Peptidase M48 Ste24p n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H7S4_ANADF
peptidase M48 Ste24p Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
peptidase M48 Ste24p
13_1_20cm_4_scaffold_394_23
RBG_16_Deltaproteobacteria_50_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18564..19292)
DNA (729bp) protein (243aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H7S3_ANADF
id=3224700 Tax=RBG_16_Deltaproteobacteria_50_11_curated
hypothetical protein
13_1_20cm_4_scaffold_394_24
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(19481..21115)
DNA (1635bp) protein (545aa)
hypothetical protein; K06890 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Thiamine pyrophosphate enzyme id=2783151 bin=GWF2_Methylomirabilis_70_14 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
thiamine pyrophosphate enzyme
13_1_20cm_4_scaffold_394_25
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21239..21898
DNA (660bp) protein (220aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13ED7_RHOPS
Uncharacterized protein {ECO:0000313|EMBL:ABE37552.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas
hypothetical protein
13_1_20cm_4_scaffold_394_26
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

22150..22779
DNA (630bp) protein (210aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Rhomboid family membrane protein id=2306563 bin=GWA2_Methylomirabilis_73_35 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rhomboid family protein
13_1_20cm_4_scaffold_394_27
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(22784..24130)
DNA (1347bp) protein (449aa)
Pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F4V7_ACIC5
Pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:ACO32721.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacteriu
pyridine nucleotide-disulfide oxidoreductase
13_1_20cm_4_scaffold_394_28
RLO_PLX_64_10, Bacteria

Not on your lists

comp(24149..24613)
DNA (465bp) protein (155aa)
Plasmid pRiA4b ORF-3-like protein n=1 Tax=Leptolyngbya sp. PCC 6406 RepID=L8L9R4_9CYAN
Plasmid pRiA4b ORF-3-like protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
Plasmid pRiA4b ORF-3-like protein
13_1_20cm_4_scaffold_394_29
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

24820..25791
DNA (972bp) protein (324aa)
HNH endonuclease Tax=GWC2_Rokubacteria_70_16_curated
HNH endonuclease id=3240863 bin=GWC2_Methylomirabilis_70_16 species=Nakamurella multipartita genus=Nakamurella taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
HNH endonuclease
Displaying 29 items

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