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13_1_20cm_4_scaffold_492

Search features with annotation key words

Displaying items 1-30 of 38 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_492_1
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

2..511
DNA (510bp) protein (170aa)
FMN-binding domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
FMN-binding domain-containing protein id=14425341 bin=bin1_lowGC species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin1_lowGC organism_group=Unknown_CP
FMN-binding domain-containing protein
13_1_20cm_4_scaffold_492_2
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

547..1428
DNA (882bp) protein (294aa)
ApbE family lipoprotein n=1 Tax=Aminomonas paucivorans DSM 12260 RepID=E3CX72_9BACT
ApbE family lipoprotein; K03734 thiamine biosynthesis lipoprotein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
ApbE family lipoprotein
13_1_20cm_4_scaffold_492_3
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

1436..1939
DNA (504bp) protein (168aa)
hypothetical protein Tax=CSP1_2_Dadabacteria
hypothetical protein id=14425339 bin=bin1_lowGC species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin1_lowGC organism_group=Unknown_CP
13_1_20cm_4_scaffold_492_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1976..2677
DNA (702bp) protein (234aa)
DtxR family iron dependent repressor; K03709 DtxR family transcriptional regulator, Mn-dependent transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
iron dependent repressor; K03709 DtxR family transcriptional regulator, Mn-dependent transcriptional regulator id=14625222 bin=bin7_NC10_sister species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
DtxR family iron dependent repressor
13_1_20cm_4_scaffold_492_5
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

2674..3003
DNA (330bp) protein (110aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
13_1_20cm_4_scaffold_492_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(3007..3942)
DNA (936bp) protein (312aa)
cytochrome c family protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Cytochrome c family protein id=4062400 bin=GWF2_Methylomirabilis_70_14 species=Thermus scotoductus genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_492_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3939..4307)
DNA (369bp) protein (123aa)
cycL; cytochrome c-type biogenesis protein cycL Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Cytochrome c-type biogenesis protein cycL id=4062401 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cycL; cytochrome c-type biogenesis protein cycL
13_1_20cm_4_scaffold_492_8
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(4535..4750)
DNA (216bp) protein (72aa)
Type III secretion fhipep protein, putative n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L5D5_THERP
Type III secretion fhipep protein, putative {ECO:0000313|EMBL:ACM06866.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobiu
type III secretion fhipep protein, putative
13_1_20cm_4_scaffold_492_9
unknown

Not on your lists

comp(4815..5126)
DNA (312bp) protein (104aa)

This feature has no annotations

13_1_20cm_4_scaffold_492_10
Acaryochloris marina, Acaryochloris, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

5202..5528
DNA (327bp) protein (109aa)
cation diffusion facilitator family transporter n=1 Tax=Streptomyces sp. CNS615 RepID=UPI00037E215B
Cation transporter {ECO:0000313|EMBL:ABW25843.1}; TaxID=329726 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Acaryochloris.;" source="Acaryochloris marina (strain MBIC 11017)
cation transporter
13_1_20cm_4_scaffold_492_11
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5536..6099)
DNA (564bp) protein (188aa)
transport-associated protein; K04065 hyperosmotically inducible periplasmic protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
13_1_20cm_4_scaffold_492_12
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6216..6443)
DNA (228bp) protein (76aa)
Uncharacterized protein n=2 Tax=Anaeromyxobacter RepID=B4UFY7_ANASK
Uncharacterized protein {ECO:0000313|EMBL:ACG72255.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
hypothetical protein
13_1_20cm_4_scaffold_492_13
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

6500..6961
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XAR2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF63097.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedo
hypothetical protein
13_1_20cm_4_scaffold_492_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(7065..7628)
DNA (564bp) protein (188aa)
ccmG; periplasmic thioredoxin (cytochrome c biogenesis) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Periplasmic thioredoxin (Cytochrome c biogenesis) id=4062402 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ccmG; periplasmic thioredoxin (cytochrome c biogenesis)
13_1_20cm_4_scaffold_492_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7625..9568)
DNA (1944bp) protein (648aa)
cycK; cytochrome c-type biogenesis protein cycK Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
cycK; cytochrome c-type biogenesis protein cycK id=14625137 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
cycK; cytochrome c-type biogenesis protein cycK
13_1_20cm_4_scaffold_492_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(9565..9999)
DNA (435bp) protein (145aa)
ccmE; cytochrome c-type biogenesis protein CcmE Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ccmE; cytochrome c-type biogenesis protein CcmE id=14625136 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
ccmE; cytochrome c-type biogenesis protein CcmE
13_1_20cm_4_scaffold_492_17
unknown

Not on your lists

comp(9996..10259)
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_20cm_4_scaffold_492_18
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(10259..10906)
DNA (648bp) protein (216aa)
ccmC; heme ABC transporter (heme exporter protein C), permease protein (cytochrome c biogenesis) Tax=GWA2_Rokubacteria_73_35_curated
Heme ABC transporter (Heme exporter protein C), permease protein (Cytochrome c biogenesis) id=4343481 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ccmC; heme ABC transporter (heme exporter protein C), permease protein (cytochrome c biogenesis)
13_1_20cm_4_scaffold_492_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(10911..11588)
DNA (678bp) protein (226aa)
Heme exporter, protein B Tax=GWA2_Rokubacteria_73_35_curated
Cytochrome c-type biogenesis protein CcmB id=4343483 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Heme exporter, protein B
13_1_20cm_4_scaffold_492_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(11585..12322)
DNA (738bp) protein (246aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=4343485 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
heme exporter protein CcmA
13_1_20cm_4_scaffold_492_21
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(12309..13127)
DNA (819bp) protein (273aa)
Cytochrome c oxidase caa3 assembly factor family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WW54_9SPHN
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
cytochrome C oxidase caa3-type, assembly factor CtaG-related protein
13_1_20cm_4_scaffold_492_22
unknown

Not on your lists

comp(13270..13362)
DNA (93bp) protein (31aa)

This feature has no annotations

13_1_20cm_4_scaffold_492_23
unknown

Not on your lists

comp(13359..13457)
DNA (99bp) protein (33aa)

This feature has no annotations

13_1_20cm_4_scaffold_492_24
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13454..13612)
DNA (159bp) protein (53aa)
Uncharacterized protein {ECO:0000313|EMBL:EYS86807.1}; TaxID=574750 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-
13_1_20cm_4_scaffold_492_25
unknown

Not on your lists

comp(13593..13757)
DNA (165bp) protein (55aa)

This feature has no annotations

13_1_20cm_4_scaffold_492_26
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13760..15145)
DNA (1386bp) protein (462aa)
Peptidase S41 n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QRF5_RALPI
peptidase S41
Tax=BJP_IG2102_Gammaproteobacteria_62_140
13_1_20cm_4_scaffold_492_27
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15142..16554)
DNA (1413bp) protein (471aa)
Cytochrome-c oxidase FixN chain {ECO:0000313|EMBL:CCE99720.1}; EC=1.9.3.1 {ECO:0000313|EMBL:CCE99720.1};; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiacea
fixN; cytochrome-c oxidase fixN chain (EC:1.9.3.1)
Cytochrome-c oxidase fixN chain n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AF88_RHIFH
13_1_20cm_4_scaffold_492_28
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(16591..17433)
DNA (843bp) protein (281aa)
endopeptidase htpX (EC:3.4.24.-); K03799 heat shock protein HtpX [EC:3.4.24.-] Tax=CSP1_6_Rokubacteria
endopeptidase htpX (EC:3.4.24.-); K03799 heat shock protein HtpX [EC:3.4.24.-] id=14625131 bin=bin7_NC10_sister species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10 rbh
endopeptidase htpX (EC:3.4.24.-)
13_1_20cm_4_scaffold_492_29
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

17687..17992
DNA (306bp) protein (102aa)
hypothetical protein; K07040 uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4343489 bin=GWA2_Methylomirabilis_73_35 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_492_30
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists


18011..18193
DNA (183bp) protein (61aa)
rpmF; 50S ribosomal protein L32 RpmF Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
50S ribosomal protein L32 id=4343491 bin=GWA2_Methylomirabilis_73_35 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Displaying items 1-30 of 38 in total

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