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13_1_20cm_4_scaffold_515

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Displaying items 1-30 of 57 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_515_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2..658)
DNA (657bp) protein (219aa)
glycosyl transferase family protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
glycosyl transferase id=4741175 bin=GWA2_Methylomirabilis_73_35 species=Oscillatoriales cyanobacterium JSC-12 genus=unknown taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycosyltransferase
13_1_20cm_4_scaffold_515_2
unknown

Not on your lists

843..1319
DNA (477bp) protein (159aa)

This feature has no annotations

13_1_20cm_4_scaffold_515_3
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(1478..3286)
DNA (1809bp) protein (603aa)
peptidase M28 Tax=CSP1_6_Rokubacteria
peptidase M28 id=14626954 bin=bin7_NC10_sister species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10 rbh
peptidase M28
13_1_20cm_4_scaffold_515_4
Candidatus Magnetobacterium bavaricum, Candidatus Magnetobacterium, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists


comp(3328..5088)
DNA (1761bp) protein (587aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=29290 species="Bacteria; Nitro
Arginine--tRNA ligase n=1 Tax=candidate division TG3 bacterium ACht1 RepID=U7DBJ9_9BACT rbh
arginyl-tRNA synthetase
13_1_20cm_4_scaffold_515_5
unknown

Not on your lists

5171..5377
DNA (207bp) protein (69aa)

This feature has no annotations

13_1_20cm_4_scaffold_515_6
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(5363..5779)
DNA (417bp) protein (139aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
hypothetical protein id=2306545 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_515_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

5811..6077
DNA (267bp) protein (89aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14626253 bin=bin7_NC10_sister species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_20cm_4_scaffold_515_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

6368..6808
DNA (441bp) protein (147aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14625221 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_20cm_4_scaffold_515_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

6847..7455
DNA (609bp) protein (203aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14625630 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_20cm_4_scaffold_515_10
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

7573..8301
DNA (729bp) protein (243aa)
phophonate C-P lyase system transcriptional regulator PhnF, GntR family; K03710 GntR family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Transcriptional regulator, GntR family id=4849826 bin=GWC2_Methylomirabilis_70_16 species=Bordetella petrii genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
transcriptional regulator
13_1_20cm_4_scaffold_515_11
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

8308..8565
DNA (258bp) protein (86aa)
hyuA; N-methylhydantoinase A Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
5-oxoprolinase (ATP-hydrolyzing) id=4849827 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
5-oxoprolinase
13_1_20cm_4_scaffold_515_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8516..10246
DNA (1731bp) protein (577aa)
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9)
hyuA; N-methylhydantoinase A Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
5-oxoprolinase (ATP-hydrolyzing) id=4849827 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_20cm_4_scaffold_515_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10243..11976
DNA (1734bp) protein (578aa)
5-oxoprolinase; K01474 N-methylhydantoinase B [EC:3.5.2.14] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
5-oxoprolinase; K01474 N-methylhydantoinase B [EC:3.5.2.14] id=14627495 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10 rbh
5-oxoprolinase (EC:3.5.2.9)
13_1_20cm_4_scaffold_515_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

11973..13133
DNA (1161bp) protein (387aa)
acyl-CoA dehydrogenase domain protein Tax=GWA2_Rokubacteria_70_23_curated
Acyl-CoA dehydrogenase domain protein id=4254262 bin=GWC2_Methylomirabilis_70_24 species=Ferroglobus placidus genus=Ferroglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
acyl-CoA dehydrogenase domain protein
13_1_20cm_4_scaffold_515_15
Tumebacillus flagellatus, Tumebacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13144..13707
DNA (564bp) protein (188aa)
Uncharacterized protein {ECO:0000313|EMBL:KEO82419.1}; TaxID=1157490 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Tumebacillus.;" source="Tumebacillus flagellatus.;"
ankyrin
ankyrin id=1245344 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
13_1_20cm_4_scaffold_515_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

13704..14870
DNA (1167bp) protein (389aa)
acetyl-CoA acetyltransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Propanoyl-CoA C-acyltransferase id=4254074 bin=GWC2_Methylomirabilis_70_24 species=Desulfotomaculum gibsoniae genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
acetyl-CoA acetyltransferase
13_1_20cm_4_scaffold_515_17
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

15006..15962
DNA (957bp) protein (319aa)
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157); K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] Tax=GWA2_Rokubacteria_70_23_curated
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxyacyl-CoA dehydrogenase family protein id=4384724 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_515_18
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

15959..16390
DNA (432bp) protein (144aa)
putative nucleic-acid-binding protein containing a Zn-ribbon Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=1703953 bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum gibsoniae genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative nucleic-acid-binding protein containing a Zn-ribbon
13_1_20cm_4_scaffold_515_19
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16387..16890
DNA (504bp) protein (168aa)
phosphoesterase Tax=RBG_16_Desulfobacca_60_12_curated
phosphoesterase id=14431491 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
phosphodiesterase
13_1_20cm_4_scaffold_515_20
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

16891..17271
DNA (381bp) protein (127aa)
cobalamin B12-binding domain-containing protein; K01849 methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Cobalamin B12-binding domain protein id=1703951 bin=GWA2_Methylomirabilis_73_35 species=Thermotoga lettingae genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cobalamin B12-binding domain-containing protein
13_1_20cm_4_scaffold_515_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

17268..18860
DNA (1593bp) protein (531aa)
methylmalonyl-CoA mutase, large subunit (EC:5.4.99.2); K01848 methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
methylmalonyl-CoA mutase, large subunit (EC:5.4.99.2); K01848 methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] id=14628013 bin=bin7_NC10_sister species=Ferroglobus placidus genus=Ferroglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10 rbh
methylmalonyl-CoA mutase, large subunit (EC:5.4.99.2)
13_1_20cm_4_scaffold_515_22
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

18854..19495
DNA (642bp) protein (214aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
id=4221745 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_20cm_4_scaffold_515_23
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

19509..21656
DNA (2148bp) protein (716aa)
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein (EC:1.17.1.4) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
xanthine dehydrogenase (EC:1.17.1.4)
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding id=1703947 bin=GWA2_Methylomirabilis_73_35 species=Mesorhizobium australicum genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
13_1_20cm_4_scaffold_515_24
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

21653..22846
DNA (1194bp) protein (398aa)
Formyl-CoA transferase (EC:2.8.3.16); K07749 formyl-CoA transferase [EC:2.8.3.16] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Formyl-CoA transferase (EC:2.8.3.16)
Formyl-CoA transferase id=1703945 bin=GWA2_Methylomirabilis_73_35 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_515_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

22843..23952
DNA (1110bp) protein (370aa)
Opine dehydrogenase (EC:1.5.1.28) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Opine dehydrogenase (EC:1.5.1.28)
NAD-dependent glycerol-3-phosphate dehydrogenase-like protein id=1703904 bin=GWA2_Methylomirabilis_73_35 species=Achromobacter xylosoxidans genus=Achromobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_515_26
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

23949..24536
DNA (588bp) protein (196aa)
4-vinyl reductase 4VR Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
4-vinyl reductase 4VR id=4254241 bin=GWC2_Methylomirabilis_70_24 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_20cm_4_scaffold_515_27
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

24569..25420
DNA (852bp) protein (284aa)
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein Tax=GWC2_Rokubacteria_70_16_curated
Inner-membrane translocator id=4849840 bin=GWC2_Methylomirabilis_70_16 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
branched-chain amino acid ABC transporter permease
13_1_20cm_4_scaffold_515_28
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

25739..26245
DNA (507bp) protein (169aa)
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Hypothetical conserved protein id=1703896 bin=GWA2_Methylomirabilis_73_35 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
inner-membrane translocator
13_1_20cm_4_scaffold_515_29
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

26348..27511
DNA (1164bp) protein (388aa)
putative branched chain amino acid ABC transporter substrate-binding protein Tax=GWA2_Rokubacteria_73_35_curated
Putative branched chain amino acid ABC transporter substrate-binding protein id=4849842 bin=GWC2_Methylomirabilis_70_16 species=Tistrella mobilis genus=Tistrella taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative branched chain amino acid ABC transporter substrate-binding protein
13_1_20cm_4_scaffold_515_30
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

27508..28836
DNA (1329bp) protein (443aa)
LivF; ABC-type branched-chain amino acid transport systems, ATPase component; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
High-affinity branched-chain amino acid transport ATP-binding proteinlivF (LIV-I protein F) id=1703893 bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
high-affinity branched-chain amino acid transport ATP-binding proteinlivF (LIV-I protein F)
Displaying items 1-30 of 57 in total

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