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13_1_20cm_4_scaffold_713

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Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_713_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1..534
DNA (534bp) protein (178aa)
Formyl-CoA transferase (EC:2.8.3.16)
dehydratase/racemase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative dehydratase/racemase id=4472498 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_713_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

599..841
DNA (243bp) protein (81aa)
alkylhydroperoxidase Tax=GWA2_Rokubacteria_70_23_curated
Alkylhydroperoxidase like protein, AhpD family id=4935478 bin=GWC2_Methylomirabilis_70_24 species=Alkaliphilus metalliredigens genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
alkylhydroperoxidase
13_1_20cm_4_scaffold_713_3
Spirochaeta sp. JC202, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

878..1129
DNA (252bp) protein (84aa)
Uncharacterized protein {ECO:0000313|EMBL:KGM44231.1}; TaxID=1329640 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta sp. JC202.;"
Carboxymuconolactone decarboxylase family protein id=4935479 bin=GWC2_Methylomirabilis_70_24 species=Octadecabacter arcticus genus=Octadecabacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
alkylhydroperoxidase
13_1_20cm_4_scaffold_713_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1135..1710
DNA (576bp) protein (192aa)
Predicted protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Predicted protein id=4472501 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Micromonas taxon_order=Mamiellales taxon_class=Mamiellophyceae phylum=Chlorophyta tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_713_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1736..2410
DNA (675bp) protein (225aa)
carboxymethylenebutenolidase (EC:3.1.1.45); K01061 carboxymethylenebutenolidase [EC:3.1.1.45] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
carboxymethylenebutenolidase (EC:3.1.1.45); K01061 carboxymethylenebutenolidase [EC:3.1.1.45] id=14626949 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
putative carboxymethylenebutenolidase
13_1_20cm_4_scaffold_713_6
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2481..3626)
DNA (1146bp) protein (382aa)
Probable monooxygenase protein n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3KNJ4_RHISN rbh
Probable monooxygenase protein {ECO:0000313|EMBL:ACP21652.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;"
monooxygenase
13_1_20cm_4_scaffold_713_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3640..4413)
DNA (774bp) protein (258aa)
Alpha/beta hydrolase fold protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQ01_PSEUX
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:AEA27197.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxani
alpha/beta hydrolase
13_1_20cm_4_scaffold_713_8
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4478..5554
DNA (1077bp) protein (359aa)
Amino acid/amide ABC transporter substrate-binding protein, HAAT family n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SI13_THEM7
Amino acid/amide ABC transporter substrate-binding protein, HAAT family {ECO:0000313|EMBL:ADU51893.1}; Flags: Precursor;; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostri
amino acid ABC transporter substrate-binding protein
13_1_20cm_4_scaffold_713_9
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5616..6737
DNA (1122bp) protein (374aa)
vitamin-B12 independent methionine synthase; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003638704
methionine synthase, vitamin-B12 independent
13_1_20cm_4_scaffold_713_10
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6806..7753
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Burkholderia multivorans CF2 RepID=J5B8G3_9BURK
Catechol 2,3 dioxygenase {ECO:0000313|EMBL:ETW92666.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
catechol 2,3-dioxygenase-like protein
13_1_20cm_4_scaffold_713_11
Mycobacterium avium, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7777..8286
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Mycobacterium avium subsp. hominissuis TH135 RepID=T2GVZ8_MYCAV
Uncharacterized protein {ECO:0000313|EMBL:BAN32285.1}; TaxID=1229671 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source=
hypothetical protein
13_1_20cm_4_scaffold_713_12
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(8302..9585)
DNA (1284bp) protein (428aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_20cm_4_scaffold_713_13
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

9770..10600
DNA (831bp) protein (277aa)
alpha/beta hydrolase fold protein Tax=CSP1_6_Rokubacteria
alpha/beta hydrolase fold protein id=14627593 bin=bin7_NC10_sister species=Acidovorax avenae genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
alpha/beta hydrolase fold
13_1_20cm_4_scaffold_713_14
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10581..11486)
DNA (906bp) protein (302aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
Uncharacterized protein {ECO:0000313|EMBL:ETX05897.1}; Flags: Fragment;; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheone
3-hydroxyisobutyrate dehydrogenase id=3352297 bin=GWA2_Methylomirabilis_73_35 species=Roseomonas cervicalis genus=Roseomonas taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_713_15
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11514..12635)
DNA (1122bp) protein (374aa)
Amidohydrolase 2 n=1 Tax=Cyanothece sp. (strain PCC 7822) RepID=E0ULZ8_CYAP2
Uncharacterized protein {ECO:0000313|EMBL:ETX05886.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
amidohydrolase 2
13_1_20cm_4_scaffold_713_16
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

12709..13746
DNA (1038bp) protein (346aa)
Inner-membrane translocator n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C902_SPHTD
Inner-membrane translocator {ECO:0000313|EMBL:ACZ40295.1}; Flags: Precursor;; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae;
inner-membrane translocator
13_1_20cm_4_scaffold_713_17

Not on your lists

13778..14329
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000321BD9A
Marine sediment metagenome DNA, contig: S01H4_C01036 {ECO:0000313|EMBL:GAG60943.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
livG1; high-affinity branched-chain amino acid transport ATP-binding protein LivG
13_1_20cm_4_scaffold_713_18
R_NC10_66_22, NC10, Bacteria

Not on your lists

14326..15054
DNA (729bp) protein (243aa)
ABC transporter-like protein n=2 Tax=Nodularia spumigena RepID=A0ZGB7_NODSP
ABC transporter-like protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
branched-chain amino acid ABC transporter ATPase
13_1_20cm_4_scaffold_713_19
CG_Delta_02, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15051..15923
DNA (873bp) protein (291aa)
Branched-chain amino acid ABC-type transport system, permease component n=1 Tax=Polaromonas sp. CF318 RepID=J3D2K3_9BURK
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein Tax=CG_Delta_02
inner-membrane translocator
13_1_20cm_4_scaffold_713_20
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

15920..17188
DNA (1269bp) protein (423aa)
braC; Leu/Ile/Val-binding protein Tax=GWA2_Rokubacteria_70_23_curated
Probable Leu/Ile/Val-binding protein id=3775401 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Pelagibacter ubique genus=Candidatus Pelagibacter taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
branched-chain amino acid ABC transporter substrate-binding protein
13_1_20cm_4_scaffold_713_21
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17214..18542)
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P028_9DELT rbh
Major facilitator transporter {ECO:0000313|EMBL:KFA87984.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" sour
major facilitator family transporter
13_1_20cm_4_scaffold_713_22
unknown

Not on your lists

comp(19132..19251)
DNA (120bp) protein (40aa)

This feature has no annotations

13_1_20cm_4_scaffold_713_23
unknown

Not on your lists

19457..19912
DNA (456bp) protein (152aa)

This feature has no annotations

13_1_20cm_4_scaffold_713_24
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

19906..21291
DNA (1386bp) protein (462aa)
40-residue YVTN family beta-propeller repeat protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EGM4_9CHLR rbh
40-residue YVTN family beta-propeller repeat protein {ECO:0000313|EMBL:CCF83836.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacte
40-residue YVTN family beta-propeller repeat-containing protein
13_1_20cm_4_scaffold_713_25
CSP1_5_NC10, NC10, Bacteria

Not on your lists

21355..21900
DNA (546bp) protein (182aa)
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=CSP1_5_NC10
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=14430305 bin=bin3_NC10 species=unknown genus=Nocardiopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin3_NC10 organism_group=NC10
rpoE; RNA polymerase sigma-70 factor, sigma-E factor
13_1_20cm_4_scaffold_713_26
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21911..22711
DNA (801bp) protein (267aa)
Transmembrane transcriptional regulator n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S9Z1_9BURK
Cupriavidus basilensis strain 4G11 chromosome main, complete sequence {ECO:0000313|EMBL:AJG18238.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiacea
putative transmembrane protein
13_1_20cm_4_scaffold_713_27
Mycobacterium avium, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23343..23693
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Mycobacterium yongonense 05-1390 RepID=S4ZKL5_9MYCO
Copper binding s, plastocyanin/azurin family protein {ECO:0000313|EMBL:EUA28462.1}; TaxID=1299329 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium a
hypothetical protein
13_1_20cm_4_scaffold_713_28
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

23722..24327
DNA (606bp) protein (202aa)
Metallophosphoesterase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XRM9_9BACT
Metallophosphoesterase {ECO:0000313|EMBL:EEF57500.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedos
metallophosphoesterase
Displaying 28 items

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