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13_1_20cm_4_scaffold_746

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Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_746_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

1..156
DNA (156bp) protein (52aa)
Kelch repeat-containing protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Kelch repeat-containing protein id=3960133 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Kelch repeat-containing protein
13_1_20cm_4_scaffold_746_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

153..794
DNA (642bp) protein (214aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Tetratricopeptide TPR_2 id=3960130 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_746_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

886..1563
DNA (678bp) protein (226aa)
putative transferase protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Probable transferase protein id=4424806 bin=GWC2_Methylomirabilis_70_24 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
putative transferase protein
13_1_20cm_4_scaffold_746_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

1612..2034
DNA (423bp) protein (141aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
GCN5-related N-acetyltransferase id=3960125 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
acetyltransferase
13_1_20cm_4_scaffold_746_5
unknown

Not on your lists

2219..2674
DNA (456bp) protein (152aa)

This feature has no annotations

13_1_20cm_4_scaffold_746_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

2827..3288
DNA (462bp) protein (154aa)
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
Putative uncharacterized protein id=3960122 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_746_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(3301..3657)
DNA (357bp) protein (119aa)
response regulator receiver protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
response regulator receiver protein id=14626491 bin=bin7_NC10_sister species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
response regulator receiver protein
13_1_20cm_4_scaffold_746_8
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(3666..5333)
DNA (1668bp) protein (556aa)
alpha-isopropylmalate/homocitrate synthase family transferase (EC:2.3.3.13); K01649 2-isopropylmalate synthase [EC:2.3.3.13] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
2-isopropylmalate synthase/homocitrate synthase family protein id=3960116 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cimA; citramalate synthase
13_1_20cm_4_scaffold_746_9
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5344..5565
DNA (222bp) protein (74aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Putative uncharacterized protein id=2811811 bin=GWC2_Methylomirabilis_70_24 species=Desulfomicrobium baculatum genus=Desulfomicrobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
13_1_20cm_4_scaffold_746_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(5611..6729)
DNA (1119bp) protein (373aa)
CaiB/BaiF family protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
L-carnitine dehydratase/bile acid-inducible protein F id=3960114 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
L-carnitine dehydratase/bile acid-inducible protein F
13_1_20cm_4_scaffold_746_11
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(6791..7219)
DNA (429bp) protein (143aa)
id=14626487 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Putative uncharacterized protein id=4119967 bin=GWF2_Methylomirabilis_70_14 species=Ferroglobus placidus genus=Ferroglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_746_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(7216..8355)
DNA (1140bp) protein (380aa)
Acetyl-CoA acetyltransferase-like protein; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=GWA2_Rokubacteria_73_35_curated
Acetyl-CoA acetyltransferase-like protein id=3960112 bin=GWA2_Methylomirabilis_73_35 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Acetyl-CoA acetyltransferase-like protein
13_1_20cm_4_scaffold_746_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(8853..9116)
DNA (264bp) protein (88aa)
fdxC; putative ferredoxin Tax=GWA2_Rokubacteria_73_35_curated
7Fe ferredoxin id=14626484 bin=bin7_NC10_sister species=Microlunatus phosphovorus genus=Microlunatus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
fdxC; putative ferredoxin
13_1_20cm_4_scaffold_746_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(9227..10129)
DNA (903bp) protein (301aa)
uncharacterized LOC100637730 Tax=GWA2_Rokubacteria_73_35_curated
Putative peptide ABC transporter permease protein id=3960111 bin=GWA2_Methylomirabilis_73_35 species=uncultured marine bacterium MedDCM-OCT-S11-C95 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glutathione transport system permease GsiD
13_1_20cm_4_scaffold_746_15
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(10256..11209)
DNA (954bp) protein (318aa)
gsiC; glutathione transport system permease GsiC; K02033 peptide/nickel transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
Putative peptide ABC transporter permease protein id=4119975 bin=GWF2_Methylomirabilis_70_14 species=uncultured marine bacterium MedDCM-OCT-S11-C95 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dipeptide transport system permease DppB
13_1_20cm_4_scaffold_746_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(11235..12827)
DNA (1593bp) protein (531aa)
ABC transporter substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC transporter substrate-binding protein id=14626481 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ABC transporter substrate-binding protein
13_1_20cm_4_scaffold_746_17
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(12891..13874)
DNA (984bp) protein (328aa)
putative oligopeptide ABC transporter ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Uncharacterized protein id=3960025 bin=GWA2_Methylomirabilis_73_35 species=Amphimedon queenslandica genus=Amphimedon taxon_order=Haplosclerida taxon_class=Demospongiae phylum=Porifera tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
oligopeptide/dipeptide ABC transporter ATPase
13_1_20cm_4_scaffold_746_18
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(13871..14923)
DNA (1053bp) protein (351aa)
oligopeptide ABC transporter ATP-binding protein; K02031 peptide/nickel transport system ATP-binding protein Tax=GWA2_Rokubacteria_73_35_curated
Putative ABC transporter id=3960022 bin=GWA2_Methylomirabilis_73_35 species=uncultured marine microorganism HF4000_010I05 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
oligopeptide/dipeptide ABC transporter ATPase
13_1_20cm_4_scaffold_746_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(14991..16244)
DNA (1254bp) protein (418aa)
group 1 glycosyl transferase; K15521 D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glycosyl transferase group 1 id=3962070 bin=GWC2_Methylomirabilis_70_24 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good rbh
group 1 glycosyl transferase
13_1_20cm_4_scaffold_746_20
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(16241..17218)
DNA (978bp) protein (326aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Uncharacterized protein id=3960018 bin=GWA2_Methylomirabilis_73_35 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_746_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(17215..17691)
DNA (477bp) protein (159aa)
regulatory protein, FmdB Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative regulatory protein, FmdB id=4177829 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
regulatory protein, FmdB
13_1_20cm_4_scaffold_746_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(17675..18760)
DNA (1086bp) protein (362aa)
glycosyl transferase group 1 protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glycosyl transferase group 1 id=4836217 bin=GWC2_Methylomirabilis_70_16 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
glycosyl transferase group 1 protein
13_1_20cm_4_scaffold_746_23
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(18912..20564)
DNA (1653bp) protein (551aa)
thiamine pyrophosphate protein central region; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Thiamine pyrophosphate protein central region id=3859439 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
thiamine pyrophosphate protein central region
13_1_20cm_4_scaffold_746_24
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(20575..21246)
DNA (672bp) protein (224aa)
putative FMN reductase (EC:1.5.1.29); K00523 CDP-4-dehydro-6-deoxyglucose reductase [EC:1.17.1.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
putative FMN reductase (EC:1.5.1.29); K00523 CDP-4-dehydro-6-deoxyglucose reductase [EC:1.17.1.1] id=14625862 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
putative FMN reductase (EC:1.5.1.29)
13_1_20cm_4_scaffold_746_25
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(21243..22178)
DNA (936bp) protein (312aa)
luciferase family protein Tax=GWA2_Rokubacteria_70_23_curated
Luciferase family protein id=3859443 bin=GWF2_Methylomirabilis_70_14 species=Frankia sp. genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative F420-dependent dehydrogenase
13_1_20cm_4_scaffold_746_26
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(22175..24235)
DNA (2061bp) protein (687aa)
short chain dehydrogenase Tax=GWA2_Rokubacteria_73_35_curated
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase id=3960006 bin=GWA2_Methylomirabilis_73_35 species=Alicyclobacillus acidocaldarius genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
short chain dehydrogenase
13_1_20cm_4_scaffold_746_27
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

24252..24431
DNA (180bp) protein (60aa)
serine/threonine-protein kinase-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying 27 items

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