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13_1_20cm_4_scaffold_761

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_761_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2..1408)
DNA (1407bp) protein (469aa)
type II secretion system protein E; K02652 type IV pilus assembly protein PilB Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Type II secretion system protein E id=4311467 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
type IV-A pilus assembly ATPase PilB
13_1_20cm_4_scaffold_761_2
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

comp(1415..1903)
DNA (489bp) protein (163aa)
MglB protein n=2 Tax=Dictyoglomus RepID=B5YEW3_DICT6
Roadblock/LC7 family protein Tax=RBG_16_Zixibacteria_43_9_curated
MglB protein
13_1_20cm_4_scaffold_761_3
Lentisphaera araneosa, Lentisphaera, Lentisphaerales, Lentisphaeria, Lentisphaerae, Bacteria

Not on your lists

comp(1900..2508)
DNA (609bp) protein (203aa)
MglA protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DTW3_9BACT
MglA protein {ECO:0000313|EMBL:EDM24932.1}; TaxID=313628 species="Bacteria; Lentisphaerae; Lentisphaeria; Lentisphaerales; Lentisphaeraceae; Lentisphaera.;" source="Lentisphaera araneosa HTCC2155.;"
gliding motility protein
13_1_20cm_4_scaffold_761_4
unknown

Not on your lists

comp(2519..3466)
DNA (948bp) protein (316aa)

This feature has no annotations

13_1_20cm_4_scaffold_761_5
Glycine soja, Glycine, Fabales, rosids, Streptophyta, Viridiplantae

Not on your lists

comp(3474..4883)
DNA (1410bp) protein (470aa)
Proline-rich receptor-like protein kinase PERK9 {ECO:0000313|EMBL:KHN13807.1}; EC=2.7.11.1 {ECO:0000313|EMBL:KHN13807.1};; TaxID=3848 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Trac
PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1-like n=1 Tax=Setaria italica RepID=UPI0003508D6D
hypothetical protein
13_1_20cm_4_scaffold_761_6
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(4883..5821)
DNA (939bp) protein (313aa)
UPI000347886C related cluster n=1 Tax=unknown RepID=UPI000347886C
putative response regulator Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
response regulator receiver protein
13_1_20cm_4_scaffold_761_7
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(5834..6622)
DNA (789bp) protein (263aa)
response regulator receiver protein Tax=CSP1_5_NC10
response regulator receiver protein id=14428717 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
response regulator receiver protein
13_1_20cm_4_scaffold_761_8
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(6600..6986)
DNA (387bp) protein (129aa)
Positive regulator of CheA protein activity (CheW) n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QCU5_9DELT
chemotaxis protein CheW; K03408 purine-binding chemotaxis protein CheW Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
frizzy aggregation protein A
13_1_20cm_4_scaffold_761_9
unknown

Not on your lists

comp(6983..7441)
DNA (459bp) protein (153aa)

This feature has no annotations

13_1_20cm_4_scaffold_761_10
Pyrococcus sp. NA2, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(7431..8522)
DNA (1092bp) protein (364aa)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=342949 species="Archaea; Euryarchaeota; Thermoco
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HN45_PYRSN
chemotaxis-specific methylesterase
13_1_20cm_4_scaffold_761_11
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(8519..9004)
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Deinococcus sp. 2009 RepID=UPI0003B44792
CheA signal transduction histidine kinase {ECO:0000313|EMBL:ADH63724.1}; TaxID=526227 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus silv
CheA signal transduction histidine kinase
13_1_20cm_4_scaffold_761_12
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(9001..11121)
DNA (2121bp) protein (707aa)
CheA signal transduction histidine kinase n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BG21_MEISD rbh
CheA signal transduction histidine kinase {ECO:0000313|EMBL:ADH63724.1}; TaxID=526227 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus silv
CheA signal transduction histidine kinase
13_1_20cm_4_scaffold_761_13
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11118..11936)
DNA (819bp) protein (273aa)
MCP methyltransferase, CheR-type {ECO:0000313|EMBL:ABK51997.1}; EC=2.1.1.80 {ECO:0000313|EMBL:ABK51997.1};; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermu
CheR-type MCP methyltransferase (EC:2.1.1.80)
MCP methyltransferase, CheR-type n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LRD7_ACIC1
13_1_20cm_4_scaffold_761_14
Deinococcus peraridilitoris, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(11955..13754)
DNA (1800bp) protein (600aa)
hypothetical protein n=1 Tax=Meiothermus timidus RepID=UPI000368576A rbh
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:AFZ65851.1}; TaxID=937777 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus pe
methyl-accepting chemotaxis protein
13_1_20cm_4_scaffold_761_15
Thermodesulfovibrio yellowstonii, Thermodesulfovibrio, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(13751..15070)
DNA (1320bp) protein (440aa)
Putative uncharacterized protein n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YJP1_THEYD rbh
Uncharacterized protein {ECO:0000313|EMBL:ACI21984.1}; TaxID=289376 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Thermodesulfovibrio.;" source="Thermodesulfovibrio yellowstonii (stra
hypothetical protein
13_1_20cm_4_scaffold_761_16
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15072..15551)
DNA (480bp) protein (160aa)
Chemotaxis signal transduction protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67P73_SYMTH
Chemotaxis signal transduction protein {ECO:0000313|EMBL:BAD40520.1}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacter
cheW2; chemotaxis signal transduction protein
13_1_20cm_4_scaffold_761_17
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(15548..15910)
DNA (363bp) protein (121aa)
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=K9ZXC3_DEIPD
putative chemotaxis regulator CheY; K02658 twitching motility two-component system response regulator PilH Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
13_1_20cm_4_scaffold_761_18
RIFOXYB2_FULL_RIF07_49_35_curated, RIF7, Bacteria

Not on your lists

16221..17009
DNA (789bp) protein (263aa)
hypothetical protein Tax=RIFOXYB2_FULL_RIF07_49_35_curated
Probable TPR-domain containing protein id=4362538 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_20cm_4_scaffold_761_19
Methanothermococcus okinawensis, Methanothermococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

17009..17410
DNA (402bp) protein (134aa)
Roadblock/LC7 family protein {ECO:0000313|EMBL:AEH06396.1}; TaxID=647113 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanothermococcus.;" source="Methanothermoc
13_1_20cm_4_scaffold_761_20
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(17411..19372)
DNA (1962bp) protein (654aa)
tricarballylate dehydrogenase Tax=GWA2_Rokubacteria_73_35_curated
Fumarate reductase/succinate dehydrogenase flavoprotein-like protein id=5011106 bin=GWA2_Methylomirabilis_73_35 species=Afipia broomeae genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
tricarballylate dehydrogenase
13_1_20cm_4_scaffold_761_21
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(19374..19688)
DNA (315bp) protein (105aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
Ethyl tert-butyl ether degradation EthD id=5011107 bin=GWA2_Methylomirabilis_73_35 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_761_22
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19796..20860
DNA (1065bp) protein (355aa)
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI000368E4A4
M29 family peptidase {ECO:0000313|EMBL:EHP43799.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensi
hypothetical protein
13_1_20cm_4_scaffold_761_23
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20857..22311
DNA (1455bp) protein (485aa)
hypothetical protein n=1 Tax=Nocardiopsis potens RepID=UPI000369ADE3
ABC transporter-like protein Tax=RBG_16_Betaproteobacteria_64_18_curated
sugar ABC transporter ATP-binding protein
13_1_20cm_4_scaffold_761_24
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22315..23286
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2N2C6_9ACTO
ribose ABC transporter permease Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
putative sugar transport system, permease
13_1_20cm_4_scaffold_761_25
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23347..24276
DNA (930bp) protein (310aa)
Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=1 Tax=Fervidobacterium pennivorans (strain DSM 9078 / Ven5) RepID=H9U9W4_FERPD
monosaccharide ABC transporter substrate-binding protein, CUT2 family; K10439 ribose transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
monosaccharide ABC transporter substrate-binding protein, CUT2 family
13_1_20cm_4_scaffold_761_26
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

24286..25260
DNA (975bp) protein (325aa)
cupin; K00450 gentisate 1,2-dioxygenase [EC:1.13.11.4] Tax=CSP1_6_Rokubacteria
cupin; K00450 gentisate 1,2-dioxygenase [EC:1.13.11.4] id=14625736 bin=bin7_NC10_sister species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
gentisate 1,2-dioxygenase
13_1_20cm_4_scaffold_761_27
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25265..27655
DNA (2391bp) protein (797aa)
coxL; carbon monoxide dehydrogenase (EC:1.2.99.2)
Carbon monoxide dehydrogenase large chain n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ISQ8_RHOCS
coxL2; carbon-monoxide dehydrogenase large subunit Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
13_1_20cm_4_scaffold_761_28
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(27630..28412)
DNA (783bp) protein (261aa)
pyridoxamine 5'-phosphate oxidase-like protein; K07226 hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
Pyridoxamine 5'-phosphate oxidase-related, FMN-binding id=5011110 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
pyridoxamine 5'-phosphate oxidase-like protein
13_1_20cm_4_scaffold_761_29
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(28409..28615)
DNA (207bp) protein (69aa)
Thioredoxin n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EQ91_RUNSL
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19
thioredoxin
Displaying 29 items

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